Gene Information

Name : Sta7437_2795 (Sta7437_2795)
Accession : YP_007133285.1
Strain : Stanieria cyanosphaera PCC 7437
Genome accession: NC_019748
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3189613 - 3190311 bp
Length : 699 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: cyc:PCC7424_28

DNA sequence : 
ATGAACATCCTTGTGGTGGAAGACGAACTAGAAATTGCTCAACTAATTAAACAAACTTTAGAACAAGAATCTTTTTCCTG
CGAGCTTGCTCACAATGGGTTAGTTGCGTTAGAAAAGTTTCAGCAGCAACAACCAGATTTAATTATTTTAGATTTAATGC
TTCCTGGTTTAGATGGTTTGGAATTATGCACTAGAATTCGTCAACAATCTCATCACAAAGATCCTTACATTTTGATGCTA
ACTGCTAGAGGAGAGGAAATTGATCGCGTTATTGGTCTTTCTACAGGTGCAGATGATTATTTAGTTAAACCTTTTAGTCC
CAGAGAGTTAGTCGCTAGAGTAAGAGCTTTATTAAGACGTAGTTTGCGTCATGGTAATTCGACATCTCAGATTTATCAAA
GCAAGCATTTTACCCTAGATTTAGACCAGCATCTGGCAACTCGGCAACTGAATCAAAATTCAGAAACTTTGGATTTAACT
ACTTTAGAATTTAATCTCCTCGCTACTTTTATGAGTTATCCAGGTCGCGTTTGGAGTCGTACCCAACTAATCGATCAATT
ATGGGGAAATGATTTTTTTGGTGATGAACGAGTAGTAGATACTCATATCCGACGTTTACGGAAAAAGATTGAACCTGATG
CTGCTCATCCTACTTTTATTAAAACTGTGATTGGTGTTGGTTATAAGTTTGAGGACTAA

Protein sequence : 
MNILVVEDELEIAQLIKQTLEQESFSCELAHNGLVALEKFQQQQPDLIILDLMLPGLDGLELCTRIRQQSHHKDPYILML
TARGEEIDRVIGLSTGADDYLVKPFSPRELVARVRALLRRSLRHGNSTSQIYQSKHFTLDLDQHLATRQLNQNSETLDLT
TLEFNLLATFMSYPGRVWSRTQLIDQLWGNDFFGDERVVDTHIRRLRKKIEPDAAHPTFIKTVIGVGYKFED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 7e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family NC_010400.5986590.p0 Protein 2e-24 45
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family NC_010410.6002989.p0 Protein 2e-25 45
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family NC_011595.7057856.p0 Protein 2e-25 45
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family NC_012469.1.7685629. Protein 3e-23 44
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family CP001918.1.gene3444. Protein 7e-18 44
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family BAC0596 Protein 4e-18 44
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family BAC0039 Protein 2e-18 44
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family CP001138.1.gene2239. Protein 4e-18 44
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family CP000034.1.gene2186. Protein 2e-18 44
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family NC_002695.1.916589.p Protein 2e-18 44
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family HE999704.1.gene2815. Protein 7e-25 43
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family AE000516.2.gene3505. Protein 6e-24 42
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family NC_008702.1.4607594. Protein 2e-21 42
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family BAC0197 Protein 1e-17 41
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family HE999704.1.gene1528. Protein 9e-20 41
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family CP000647.1.gene2531. Protein 2e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sta7437_2795 YP_007133285.1 two component transcriptional regulator, winged helix family VFG1702 Protein 3e-18 41