Gene Information

Name : Sta7437_2297 (Sta7437_2297)
Accession : YP_007132805.1
Strain : Stanieria cyanosphaera PCC 7437
Genome accession: NC_019748
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase, class II
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 2603828 - 2605549 bp
Length : 1722 bp
Strand : +
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase, class II; InterPro IP

DNA sequence :
ATGGCAGACAATCAATCCCCCAATAAGCAGCAACCAAGCTCTACGTTAGAAGAAATTCGTGCTAATAGAATTGAAAAAGT
TGAAGAACTTAAACAATTGGGATTGAATCCTTATGCTTATAAATGGGAAATAACTGATCACGCAGCCGAGTTACAAGAAA
AATATCGCGATTTAGCTGACGGAGAAGAAATTGAAGAGGAAGTAGCGATCGCAGGAAGAATTGTTGCTCGTCGTGTTTTT
GGTAAGCTAGCTTTTTTTGAAATTCAAGATGAAACTGGCAAAATTCAATTATATTTAGATAAGAAAAAAATTAATCAGAA
AATGTCTGATTTGGAAGGAGCTTTTAATCACCTCAAAAAGCTTACTGACACAGGCGATATTTTAGGAGTAAAAGGAACAA
TCAAAAGAACAGAAAAAGGTGAACTTTCTGTTTATGTAGGCGAGTATGCCATTCTCACCAAATCTTTATTACCTCTACCA
GATAAATGGCATGGTTTAACTGATACTGAAAAACGTTATCGTCAGCGTTACGTTGATTTAATAGTTAATCCACAAGTTAG
ACAAACCTTCCGTCGTCGCGCTCAAATCACGGCTGGAATTCGTCGTTATTTAGAACAGCGCGATTTTTTAGAAATAGAAA
CTCCTGTTTTACAAAGTCAAGCAGGTGGTGCAGATGCTCGTCCTTTTATTACTTATCACAACACTTTGGAGATGGATTTA
TATCTCCGCATCGCGACTGAATTACATCTCAAAAGATTAATTGTTGGTGGTTTTGAAAAAGTATTTGAATTAGGTAGAAT
CTTTCGCAACGAAGGAGTTTCTACTCGTCACAATCCTGAATTTACTTCGATAGAAGTTTATCAAGCATACGCCGATTATA
ACGATATGATGGCGTTAACAGAAGACTTAATTAGTAGCGTTACTCAAGAAGTTTTGGGTACAACTAAACTTACTTATCAA
GGAGAAGAAATTGACTTAACTCCTCCTTGGCGAAGAGTAACTATGCATGAGTTAGTTCAAGAAGCAACTGGTTTAGATTT
TAATTCATTTAATGATTTTGAATCAGCCAAAGTTGCAGCACAAAAAGCAGGAATAGAAGTACCAAATGACTGTCAAACTA
TTGGTAAACTTCTCAATGAAGCCTTTGAACAAAAAGTAGAAGAAACTTTAATTCAACCAACTTTTGTAGTTGATTATCCT
GTGGAAATTTCTCCTCTTGCTAAACCTCATAGAAATAAAGCAGGATTAGTAGAAAGATTTGAATTATTTATTGTGGGTAG
AGAAACTGCCAATAGTTTTTCTGAATTAACCGATCCCTTAGATCAAAGAGAAAGATTAGAAGCACAAGCAGAAAGGAAAG
CAGCAGGAGACGTAGAAGCTCATGATGTTGATGAAGACTTTTTGGCAGCTTTAGAATATGGTATGCCTCCTACAGGTGGA
TTAGGAATTGGAATTGATCGCTTGGTAATGCTATTAACCGATTCTCCTAGCATTCGTGATGTAATTGCTTTTCCCCTATT
AAAAAGTCAAAGTGTAGCTATTAAATCTTTTGACTATGATGCAGAAAAAAAAATCCTAAAAATTGAATTTAATCACGGTG
GTATTTATAAATATTTAGATGTACCAAAATCTATTTACAAAGAATTAAAAGAAACTCCCTCTGTAGGTCAGTATTTTAAT
AGTAAGATTCGAGATAAATTTGGTTGCGATCGCGAACTTTAG

Protein sequence :
MADNQSPNKQQPSSTLEEIRANRIEKVEELKQLGLNPYAYKWEITDHAAELQEKYRDLADGEEIEEEVAIAGRIVARRVF
GKLAFFEIQDETGKIQLYLDKKKINQKMSDLEGAFNHLKKLTDTGDILGVKGTIKRTEKGELSVYVGEYAILTKSLLPLP
DKWHGLTDTEKRYRQRYVDLIVNPQVRQTFRRRAQITAGIRRYLEQRDFLEIETPVLQSQAGGADARPFITYHNTLEMDL
YLRIATELHLKRLIVGGFEKVFELGRIFRNEGVSTRHNPEFTSIEVYQAYADYNDMMALTEDLISSVTQEVLGTTKLTYQ
GEEIDLTPPWRRVTMHELVQEATGLDFNSFNDFESAKVAAQKAGIEVPNDCQTIGKLLNEAFEQKVEETLIQPTFVVDYP
VEISPLAKPHRNKAGLVERFELFIVGRETANSFSELTDPLDQRERLEAQAERKAAGDVEAHDVDEDFLAALEYGMPPTGG
LGIGIDRLVMLLTDSPSIRDVIAFPLLKSQSVAIKSFDYDAEKKILKIEFNHGGIYKYLDVPKSIYKELKETPSVGQYFN
SKIRDKFGCDREL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-105 50
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 9e-80 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sta7437_2297 YP_007132805.1 lysyl-tRNA synthetase, class II VFG1668 Protein 6e-106 50