Gene Information

Name : Sta7437_2150 (Sta7437_2150)
Accession : YP_007132665.1
Strain : Stanieria cyanosphaera PCC 7437
Genome accession: NC_019748
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2412972 - 2415338 bp
Length : 2367 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR0041

DNA sequence :
ATGTTTGAATATTTTAACGACAAAGCAATCAAAAGCATCATTCTGGCTCAAGAAGAAGCCAGAAGCACAGGCCATAATCT
TGTCGGTAGCGAACATCTATTATTGGGAGTGATAGGGGAGGGGACATCGATCGCAGCAACTGTATTAGCAGATAAAGGAA
TTAATGTTAATCAAACTAGGAAACTGATCGAACAATATAGTGGTAGAGGTAGCGGTTTTAGTCCAGCCAATCTTCCTTTT
ACTCCTAAAGTCAAGAGTATTTTTGATCAGGCATTGATCGAAGCACGTCAATTAGATCGTAAAAATATTACTCCTGCACA
CATATTACTTGCGATCGCTAAAGATTCTGATTCTGTGGCAGCTAAAGTATTAATTCAACAAGGAATTAAATTAAATCAAC
TGCGAACAGATTTACTGAAGAAATTAGCAGAACCAGAACCGATTGGTGCAGCCAACAAAAGAGAAAATCCCTTTAACTTT
GGTAATCCCAATGCAGCTAAACCTACTTTAAAAGAATTTGGAGTTAATCTAACTCAATTAGCTAAAGAAGGTAAACTCGA
TCCTGTGATTGGAAGAGAAGCAGAAATTGCCCGAACTGTTCAGATTTTAGGACGTAGAACCAAAAATAATCCCGTTTTAG
TAGGAGAACCAGGAGTAGGCAAAACTGCGATCGCAGAAGGATTAGCTCAACGAATTGTCGACGAAGATGTTCCTGAATTA
ATTAAAGATAAACAAGTAATTAGTTTGGACATGGGTTTATTATTAGCAGGAACTAAGTTTCGAGGTGAATTTGAAGAACG
ACTCAAAGCCATTGTTGATGAAGTGCGTCAAGCAGGAAATATTATCCTAGTCATCGATGAAATTCATACCCTAGTAGGTG
CAGGAGCGATGGGAGGCGCAATGGATGCTGCCAACTTACTCAAACCAGCCTTAGCTAGAGGAGAATTCCAATGTCTTGGT
AGCACCACCCTCGATGAATATCGTCAACATATCGAACGAGATGCAGCTTTAGAACGTCGTTTCCAAAAAGTCATGATTGG
AGAACCTTCTGTAGCAGACGCGATCGCAATTATCCGAGGCTTACGTAAAACCTACGAAGAATTTCACCAAGTTAAATATA
CAGAAAAAGCTTTAGAAGCAGCAGTTACTCTATCCGAACGTTATATTTCTGACCGTTTCTTACCTGATAAAGCCATTGAT
TTAATTGATGAAGCTGGTTCACGAATTCATTTAAGACATTCTCAACAAACAGATCAAAAACACCAAGAAGAAACCCAAGT
TCCAATCATCAATCCTAAATCCTTAACTCCTGTAGTAGACGAAGCAGAAATTGCTCACATTGTCGCTTCCTGGACAGGAA
TTCCAGTCAATAAAATCAACCAAACCGAATCAGAAGTTTTACTCAATCTCGAAGCCAATCTCCACGAACGGGTAATTGGT
CAAGATGAAGCAGTTTGCGCCGTTTCTCGTGCCTTAAGAAGAGCTAGAGCGGGTTTAAGCAGTCCTAATCGTCCGATTGC
TAGTTTTATTTTCTCTGGCCCTACTGGTGTAGGTAAAACCGAGCTTGCTAAAGCCTTAGCAACCTATATGTTTGGCTCGG
AAAACGCCATGATTAGACTAGATATGTCCGAATTCATGGAATCTCACACCGTTTCCAAATTAATTGGTTCGCCTCCTGGT
TATATTGGTTACGACGAAGGCGGACAACTCACCGAAGCTATTCGCCGTCAACCCTACAGTTTAGTTCTGTTTGATGAGAT
AGAAAAGGCACATCCAGATGTCTTCAATCTACTCTTACAACTTCTAGATGATGGTCGTTTGACTGATGCTCAAGGACGTG
TAGTTAATTTTAACAATGCGATCATCATTATGACCTCTAACATCGGTTCTAAAGTAATCGAAAAAGGAGGCACAGGACTA
GGTTTTGCCGTCGCAGACAACCAAACAGATGCTCAATACCAACAGATACGTGCTTTAGTTAACGAAGAACTTAAACAATA
TTTCCGTCCAGAGTTCCTTAACCGTCTCGATGAAATTATTGTCTTTCGTCAACTTACTAAACCAGAAGTTCAACAAATTG
CCGAGCTTCTTTTACAAGAAATCGCACAAAGATTGCAACAAGAACGCTCTATCAATCTAGAAGTTAGCGAAGCTTTCCAA
GAGAAAGTCATTGCTGAAGGATTCGATCCTAGCTATGGTGCAAGACCTTTACGTCGAGCAATTATGAGATTGTTAGAAGA
TAGTTTGGCAGAAGCAATTTTATCTGGTCAAATTCAAGATGGCGATCAAGCTTTAATAACCGTTGATGACGGAGAAGTAA
AAGTCTTACCTATACAGCAACCAGTTCTTGTCGAATCTCATCGTTAA

Protein sequence :
MFEYFNDKAIKSIILAQEEARSTGHNLVGSEHLLLGVIGEGTSIAATVLADKGINVNQTRKLIEQYSGRGSGFSPANLPF
TPKVKSIFDQALIEARQLDRKNITPAHILLAIAKDSDSVAAKVLIQQGIKLNQLRTDLLKKLAEPEPIGAANKRENPFNF
GNPNAAKPTLKEFGVNLTQLAKEGKLDPVIGREAEIARTVQILGRRTKNNPVLVGEPGVGKTAIAEGLAQRIVDEDVPEL
IKDKQVISLDMGLLLAGTKFRGEFEERLKAIVDEVRQAGNIILVIDEIHTLVGAGAMGGAMDAANLLKPALARGEFQCLG
STTLDEYRQHIERDAALERRFQKVMIGEPSVADAIAIIRGLRKTYEEFHQVKYTEKALEAAVTLSERYISDRFLPDKAID
LIDEAGSRIHLRHSQQTDQKHQEETQVPIINPKSLTPVVDEAEIAHIVASWTGIPVNKINQTESEVLLNLEANLHERVIG
QDEAVCAVSRALRRARAGLSSPNRPIASFIFSGPTGVGKTELAKALATYMFGSENAMIRLDMSEFMESHTVSKLIGSPPG
YIGYDEGGQLTEAIRRQPYSLVLFDEIEKAHPDVFNLLLQLLDDGRLTDAQGRVVNFNNAIIIMTSNIGSKVIEKGGTGL
GFAVADNQTDAQYQQIRALVNEELKQYFRPEFLNRLDEIIVFRQLTKPEVQQIAELLLQEIAQRLQQERSINLEVSEAFQ
EKVIAEGFDPSYGARPLRRAIMRLLEDSLAEAILSGQIQDGDQALITVDDGEVKVLPIQQPVLVESHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-174 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sta7437_2150 YP_007132665.1 ATPase AAA-2 domain protein VFG0079 Protein 7e-178 52
Sta7437_2150 YP_007132665.1 ATPase AAA-2 domain protein VFG0080 Protein 3e-133 50