Gene Information

Name : Sta7437_1578 (Sta7437_1578)
Accession : YP_007132111.1
Strain : Stanieria cyanosphaera PCC 7437
Genome accession: NC_019748
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1772887 - 1775502 bp
Length : 2616 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activi

DNA sequence :
ATGCAACCAACCAACCCACAAAAATTTACTGAAAAAGCCTGGCAAGCAATTGTTCGGACTCCCGACATTGCTAAAGAAAA
TAAACATCAACAAATTGAAAGCGAACATTTACTCAAAGCACTAATCGAAGAGGAAGGATTAGCCAATAGTATCTTCAACA
AGGCTAATATTAGTGTTCAACGAGTGCGGGATAAAACCGATGAGTTTATCAATCGCCAACCGAAGGTATCTAATCTAGGA
GAGTCGGTTTATCTGGGACGTAGTTTAGATACTCTTTTAGATCGGGCGGAAAATCATCGTAAGGAATTCGGCGATGAATA
TATTTCCATCGAACATCTACTCTTAGCTTATGCCAAAGACGATCGCTTGGGTAGAAAGTTATTTCAAGAGTTTGGACTGA
GCGAAAATAAACTGAGGGAAATTATTCAAGATGTGAGAGGTAGTCAAAAAGTTACCGATCAAAATCCTGAAGGCAAGTAT
CAATCTCTAGAAAAGTATGGTAGAGAATTAACCCAACTAGCAAGACAAGGTAAACTCGATCCTGTCATTGGTAGGGATGA
AGAAATTCGTCGTACCATTCAAATCCTTTCCCGTCGTACTAAAAATAACCCCGTGTTAATTGGTGAACCTGGGGTAGGTA
AGACTGCTATTGTAGAGGGATTGGCACAGAGAATTGTCAACCGTGATGTACCTGAGTCATTACGCGATCGCAAATTAATC
GCTTTGGATATGGGTGCATTGATTGCAGGGGCAAAATATCGCGGTGAATTTGAAGAAAGACTCAAAGCTGTGCTTAAGGA
AGTTACAGAGTCGGAAGGTAATATTATCATGTTTATTGATGAGATTCATACCGTAGTAGGTGCAGGTGCGACTCAAGGGG
CGATGGATGCAGGTAATTTACTCAAACCGATGTTAGCTAGGGGTGAATTGCGCTGTATTGGTGCGACTACTTTGGATGAG
TATCGCAAGTATATTGAAAAGGATGCTGCCTTAGAAAGACGTTTCCAATCTGTACTAGTAGACGAACCCAATGTAATTGA
TACTATTTCGATTCTAAGAGGATTGAAAGAACGCTATGAAGTTCACCACGGGGTCAAAATTTCCGACACTTCCTTAGTTG
CTGCTGCTACTCTTTCTAATCGTTACATCAGCGATCGCTTTTTACCAGATAAGGCGATTGACTTAGTAGACGAGGCTGCT
GCGAAGTTAAAGATGGAAATTACCTCTAAACCAGAGGAATTAGATGAAATAGACCGTAAAATTCTCCAATTAGAAATGGA
ACGGTTATCTTTACAAAAAGAAGATGACATCCTTTCACGAGAAAGATTGGAAAAATTGGAAAAAGAACTAGCCAATCTTA
AAGAAGAGCAATCAGAATTAAACGCGCAATGGCAGTCAGAAAAAGAAGTTATCGACCAAATTCGCACGCTTAAGGAAGAA
ATTGACCGAGTTAACCTCGAAATTCAACAAGCGGAACGGGATTACGACCTCAATCGCGCTGCGGAATTACGCTATGGGAA
ACTAACTGACTTACAAAGACAAATTAGAGAAATTGAAAGTAAGCTTGCAGAAAGACAAACTACTGGTCGCAATATGCTCA
GAGAAGAAGTAACGGAAGCGGATATTGCTGAAATTATTTCTAAATGGACTGGTATCCCAATTAGTAAGTTAGTCGAATCT
GAAAAAGAAAAACTTCTCCATCTCGAAGACGAATTACATCAACGAGTAATTGGACAGGATGAAGCTGTCATTGCGGTAGC
GGATGCTATTCAACGTTCTCGCGCTGGTTTAGCCGATCCCGAACGTCCTACTGCTAGCTTTATTTTCCTTGGTCCCACTG
GAGTAGGTAAAACGGAACTAGCTAAAGCTTTAGCTGTTACTCTCTTTGATAGTGAAGAAGCTTTGGTACGGATCGATATG
TCCGAATATATGGAGAAACACACCGTTTCCCGTCTCATCGGCGCACCTCCTGGATATGTGGGTTATGAAGAAGGTGGACA
ATTAACCGAAGCAATTCGCCGTCGTCCCTATTCCGTCATTCTCTTTGATGAGATTGAAAAGGCACACAACGATGTCTTCA
ACATTATGCTACAAATCCTCGATGATGGCAGGCTTACTGATTCTCAGGGTCGTACGGTAGATTTCAAGAATACTATCATC
ATTATGACCAGTAATATTGGTTCTCAATACATCCTCGATGTAGCTGGCGATGATAACCGTTATGAAGAAATGCGATCGCG
CGTGATGGATGCAATGCGGAATAACTTCCGTCCTGAATTCCTCAACCGTATCGATGAGATTATTATCTTCCACGGCTTAC
AAAAAGCGCAATTACGTAACATCGTCAAGATTCAAATCAAACGTCTCGAAGATCGTTTAGATGAACAAAAACTATCCTTG
AAGATGTCCGAAGCAGCCTTAGATTTCTTAGCCGAACTCGGTTACGATCCAGTATACGGTGCTAGACCATTAAAACGGGC
AATTCAAAGATACTTAGAAACTGCGATCGCTAAATCGATTTTACGAGGCGAATTTAAAGGCGGAGACACCATCTTTGTGG
ATGTTGAAGATGAACGTTTAAGCTTGAAACGTGTGCCAGTTGAGATGTTAGCTTAA

Protein sequence :
MQPTNPQKFTEKAWQAIVRTPDIAKENKHQQIESEHLLKALIEEEGLANSIFNKANISVQRVRDKTDEFINRQPKVSNLG
ESVYLGRSLDTLLDRAENHRKEFGDEYISIEHLLLAYAKDDRLGRKLFQEFGLSENKLREIIQDVRGSQKVTDQNPEGKY
QSLEKYGRELTQLARQGKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNRDVPESLRDRKLI
ALDMGALIAGAKYRGEFEERLKAVLKEVTESEGNIIMFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDE
YRKYIEKDAALERRFQSVLVDEPNVIDTISILRGLKERYEVHHGVKISDTSLVAAATLSNRYISDRFLPDKAIDLVDEAA
AKLKMEITSKPEELDEIDRKILQLEMERLSLQKEDDILSRERLEKLEKELANLKEEQSELNAQWQSEKEVIDQIRTLKEE
IDRVNLEIQQAERDYDLNRAAELRYGKLTDLQRQIREIESKLAERQTTGRNMLREEVTEADIAEIISKWTGIPISKLVES
EKEKLLHLEDELHQRVIGQDEAVIAVADAIQRSRAGLADPERPTASFIFLGPTGVGKTELAKALAVTLFDSEEALVRIDM
SEYMEKHTVSRLIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHNDVFNIMLQILDDGRLTDSQGRTVDFKNTII
IMTSNIGSQYILDVAGDDNRYEEMRSRVMDAMRNNFRPEFLNRIDEIIIFHGLQKAQLRNIVKIQIKRLEDRLDEQKLSL
KMSEAALDFLAELGYDPVYGARPLKRAIQRYLETAIAKSILRGEFKGGDTIFVDVEDERLSLKRVPVEMLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-106 41
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 4e-100 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 3e-100 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sta7437_1578 YP_007132111.1 ATP-dependent chaperone ClpB VFG2084 Protein 2e-104 43
Sta7437_1578 YP_007132111.1 ATP-dependent chaperone ClpB VFG2076 Protein 2e-111 41