|
Name : Glo7428_0872 (Glo7428_0872) Accession : YP_007126614.1 Strain : Gloeocapsa sp. PCC 7428 Genome accession: NC_019745 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase, class II Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 965048 - 966775 bp Length : 1728 bp Strand : + Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase, class II; InterPro IP DNA sequence : ATGTCTGCCGATCAGTCTTCAAATTCTCAAAGTACCTCAAGTTTAGAAGAAATCCGTGCTGCGCGTTTAGAAAAAGTCGC TCAACTCAAGCAACTAGGGATGAATCCTTACGCTTACCGCTGGGAAGTGACACATCATGCTGCACAATTGCAAGAAAAAT TTGCTGATTTACCAAGTGGTGAAGAAGTCGATGTGGAAGTGGCGATCGCCGGTCGTATTTTGGCACGTCGCGTCTTTGGT AAACTTGCTTTTTTCAGCTTGCAAGATGAAACTGGCACAATTCAACTATACCTGGATAAAAAAAGAATCCAGCAAGGCAT GGCAAGTACCGATCCTGATGCTTTCAATCACTTGAAGCAGCTAACGGATGTAGGAGACATTTTAGGAGCCAAAGGTACGG TCAAGAAGACGGAAAAAGGTGAATTATCCGTCAACGTCAGCGAGTACGCGATTCTGACTAAATCTTTATTGCCTTTACCA GATAAATGGCACGGTCTTACAGATACCGAAAAGCGCTATCGTCAGCGGTACGTTGATTTAATTGTTAATCCAGAAGTCCA GCAAACATTTCGTCGCCGCGCTCAAATTACTGCGGGAATTCGTCGTTATTTAGAAGCGCAAGGCTTTATTGAAATTGAAA CGCCTGTCCTACAACCAGAGGCGGGAGGTGCGGATGCACGTCCATTTATCACCTACCACAATGCGCTAGACATGGAGTTG TATCTGCGAATTGCAACCGAACTACATCTCAAGCGGATGATCGTCGGTGGGTTTGAAAAAGTCTTCGAGTTAGGACGCAT TTTTCGTAATGAAGGCGTTTCAACACGCCACAACCCAGAATTTACGTCAGTAGAAGTTTACCAAGCTTATGGTGACTACA ATGACATGATGGCGCTGACGGAAGACTTGATTACTACTGTGGCGCAAGAGGTTTTGGGTACGCTGCAAATTACTTATCAA GGTGAGGCGATCGATTTAACTCCTCCCTGGCGACGCGTGACGATGCATGATTTAGTTAAGGAATTTACAGGACTTGATTT CGCGGCATTTTCTACGCTGGAAGAAGCAAAAACAGCAGCAGCGAGTGTGGGGATTGATGTTGAGGATTGTGATTCGATTG GTAAAGTTCTCAACGAAGCATTTGAGCAAAAAGCCGAATCGCAACTTATTCAGCCGACGTATGTTCTCGACTATCCTGTA GAAATTTCACCTTTGGCAAAGCCGCATCGTTCTAAGCCTGGTTTGGTTGAACGATTTGAATTGTTTATTGTGGGTAGAGA AACCGCCAATGGTTTTTCGGAATTAACCGATCCGATCGACCAACGTCAGCGACTCGAAGCCCAAGCAGCGCGTAAAGCAG CTGGAGATTTGGAAGCGCAGGGCGTCGATGAAGATTTTATCACCGCTCTAGAATACGGAATGCCACCAACTGTAGGTTTA GGTATTGGGATTGACCGCTTCGTAATGCTGTTAACAGATTGTGCGAGTATTCGCGATGCGATCGCTTTTCCGTTACTCAA ATCTGCTAGCAGCTTAATCAAAAAATACGATTACGATCCGGCAAGAAAACTTCTCCAAATCGAATTCAAAAATGGCAGCA TCTACAACTACCAAGATGTTCCCGCTGATATTGCACAAGGACTAGAACAAGAAACTTCTCAAGGACAATACTTCAACGAG TTCATTCGAGGTAAATTTGCTTATGACCAAGTGCGGTTAAAAAAGTGA Protein sequence : MSADQSSNSQSTSSLEEIRAARLEKVAQLKQLGMNPYAYRWEVTHHAAQLQEKFADLPSGEEVDVEVAIAGRILARRVFG KLAFFSLQDETGTIQLYLDKKRIQQGMASTDPDAFNHLKQLTDVGDILGAKGTVKKTEKGELSVNVSEYAILTKSLLPLP DKWHGLTDTEKRYRQRYVDLIVNPEVQQTFRRRAQITAGIRRYLEAQGFIEIETPVLQPEAGGADARPFITYHNALDMEL YLRIATELHLKRMIVGGFEKVFELGRIFRNEGVSTRHNPEFTSVEVYQAYGDYNDMMALTEDLITTVAQEVLGTLQITYQ GEAIDLTPPWRRVTMHDLVKEFTGLDFAAFSTLEEAKTAAASVGIDVEDCDSIGKVLNEAFEQKAESQLIQPTYVLDYPV EISPLAKPHRSKPGLVERFELFIVGRETANGFSELTDPIDQRQRLEAQAARKAAGDLEAQGVDEDFITALEYGMPPTVGL GIGIDRFVMLLTDCASIRDAIAFPLLKSASSLIKKYDYDPARKLLQIEFKNGSIYNYQDVPADIAQGLEQETSQGQYFNE FIRGKFAYDQVRLKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-110 | 48 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-88 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Glo7428_0872 | YP_007126614.1 | lysyl-tRNA synthetase, class II | VFG1668 | Protein | 2e-110 | 48 |
