Gene Information

Name : Glo7428_4836 (Glo7428_4836)
Accession : YP_007130425.1
Strain : Gloeocapsa sp. PCC 7428
Genome accession: NC_019745
Putative virulence/resistance : Resistance
Product : Sigma 54 interacting domain protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.28
Position : 5393437 - 5394156 bp
Length : 720 bp
Strand : +
Note : TIGRFAM: ABC exporter ATP-binding subunit, DevA family; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593:IPR014324; KEGG: naz:Aazo_0090 DevA family ABC exporter ATP-binding subunit; PFAM: ABC tra

DNA sequence : 
ATGCAACAACCAGCACTAAAAATTCAATCTCTTAACCACTACTATGGTAAAGGCGTTTTGCAAAAGCAAACTTTACTCGA
TATTAATTTAGAAATTGGTGCGGGAGAGTTTGTGATTATTACAGGACAATCAGGATCGGGAAAAACAACATTACTCAGTT
TGATTGGTGGTTTGCGTTCTGTACAATCAGGAAGTATTCAGTTTCTCGGTCAAGAATTATCCGGCGCAAGTCAGCAAAAG
CTAACAAAACTGCGACGCCAAATCGGTTATATTTTTCAATCACACAACTTACTAGGATTTCTCACAGCACAGCAAAATGT
GCAAATGGCAGCGCAAGTCAACAATAACATTTCGCTGCAAGTTGCGCGATCGCAAACAATTCTTCAAGCAGTCGGGTTAG
GCGATCGCCTCAATTACTACCCCGAAAATCTCTCTGGTGGACAAAAACAACGCGTTGCGATCGCCAGGGCTTTAGTCAAT
CAACCTAAACTTGTCTTAGCTGACGAACCAACAGCATCTTTAGATAGCAAATCTGGTCGTGCTGTTGTTGAATTGATGCA
GCATCTTGCTCAAGAACAAAGCTGTACAATTGTCATGGTGACGCACGATAATCGTATTTTAGACGTTGCCGACCGTATTA
TTCATATGGAAGATGGTCACTTAAGCGGCAATCATCGCTTCACATCAGATACGCACCAATTAATTCATTTTGATTCATAA

Protein sequence : 
MQQPALKIQSLNHYYGKGVLQKQTLLDINLEIGAGEFVIITGQSGSGKTTLLSLIGGLRSVQSGSIQFLGQELSGASQQK
LTKLRRQIGYIFQSHNLLGFLTAQQNVQMAAQVNNNISLQVARSQTILQAVGLGDRLNYYPENLSGGQKQRVAIARALVN
QPKLVLADEPTASLDSKSGRAVVELMQHLAQEQSCTIVMVTHDNRILDVADRIIHMEDGHLSGNHRFTSDTHQLIHFDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glo7428_4836 YP_007130425.1 Sigma 54 interacting domain protein NC_012469.1.7686878. Protein 9e-30 45
Glo7428_4836 YP_007130425.1 Sigma 54 interacting domain protein CP001581.1.gene598.p Protein 9e-32 43
Glo7428_4836 YP_007130425.1 Sigma 54 interacting domain protein NC_012469.1.7685735. Protein 2e-31 41