Gene Information

Name : Glo7428_4537 (Glo7428_4537)
Accession : YP_007130135.1
Strain : Gloeocapsa sp. PCC 7428
Genome accession: NC_019745
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5047497 - 5049965 bp
Length : 2469 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit

DNA sequence :
ATGTTTGAATACTTTACAGATAAAGCCATCAAGGTCATCATGCTATCCCAGGAAGAGACACGTCGCCTGGGACACAACTT
GGTAGGAACCGAGCAGATTCTTTTAGGCTTGATTGGAGAAGGTACGGGAGTAGCAGCAAAAGTGCTGACCGAGCTAGGAG
TATCCCTCCAAGATGCACGCACAGAAGTAGAAAAAATTATCGGTAGGGGAAATCGATTCGTCCCCGCTGAACTTCCTTTC
ACTCCCAAAGTTAAGCGTGTTTTTGAGCAAGCTCTAGCTGAAGCTCGGCAACTCGGAAACAACTACATTGATACAGAACA
CATTCTCTTAGGATTACTTCGCGAAGGCGACGGCGTAGCAGCGAAAGTGCTGAGTAATTTAGGTATTCACCCCGAACAAA
TTCGCACCGCAGTCATTAAAAAGCACGGAGAAGTAGCAGCGGTGTCTGTGGGTAATACCGACCGCCGTAGTGGTCGCACT
GCAAGTAAAACAGCGACTTTAGATGAATTTAGCACCAATTTAACAAAGCTCGCCGCCGAAGGTAAGCTTGACCCTGTTGT
GGGGCGCGAGAAAGAAATCGAACGCGCAATCCAAATTCTCGGACGGCGGACGAAGAATAACCCCGTGTTAATCGGCGAAC
CTGGTGTTGGTAAAACCGCGATCGCCGAAGGACTGGCACAACGAATTGTTAATCAAAACGTTCCTGACATCCTGGAAGAT
CGCCAAGTCGTCAGCCTAGACATGGGCTTACTGATTGCGGGTACACGCTTTAGAGGTGACTTTGAAGAACGCATCAAAGC
AATCATGGAGGAAATTCGCGCTGCGGGTAACATCATCTTAGTGATTGACGAAATTCACACTTTGATCGGTACTGGTGGTG
TTGAAGGTGGTATGGATGCAGCGAACATCCTCAAGCCAGCCTTAGCCCGTGGTGAATTGCAGTGTCTCGGTGCTACAACA
CTCGATGAATACCGCAAGCACATCGAACGCGATGCAGCACTCGAGCGTCGTTTCCAGCCAATTATGGTTGGCGAACCTTC
GGTAGATGAAACGATTGAGATTCTGCACGGTTTACGCGCTACTTACGAACAACATCACCGCGTCAAAATTACTGATGTCG
CACTCGAAGCTGCTGCGAAGCTATCAGATCGTTACATTAGCGATCGCTTCTTACCCGACAAAGCCATCGACTTGATTGAC
GAAGCAGGTTCGCGCGTTCGTTTGAGAAACTCGCAAGCATCCGTGACCAGTGAAGTCAAGCGCGAATTAGTCCAAGTATC
GCGCGCTAAAGAAGCCGCCGTTAGAGCACAAGACTTCGATAAAGCAGGACAGCTGCGCGATCGCGAGTTAGAACTCGAAG
CCCAAATCAAGGCGATTGCTGAAAATCAAAACAAGGATGTCAACACTCCTGTTGTCGATGAAGAAGACATCGCGCAAATC
GTTGCTTCGTGGACTGGCGTACCCGTTAATAAGCTGACCGAAACCGAATCAGAATTGCTGTTGCACTTAGAAGACACCCT
ACATCAGCGGATTATCGGTCAACAAGAAGCTGTCACCGCAGTTTCGCGAGCAATTCGCCGCGCGCGAGTCGGCTTAAAGA
GTCCCGATCGCCCGATTGCTAGCTTTATCTTCTCAGGTCCTACCGGAGTTGGTAAAACCGAATTAACCAAAGCGCTTGCT
TCATATTTCTTCGGTTCAGAAGAAGCGATGATTCGCCTCGATATGTCCGAATTCATGGAGCGCCACACAGTTTCCAAGCT
AATTGGTTCACCTCCAGGATACGTTGGTTACGACGAAGGCGGACAACTCACCGAAGCAGTGCGTCGCAGACCTTACACTG
TAGTGCTATTCGACGAAATCGAAAAAGCACACCCTGATGTCTTCAACATGATGTTGCAAATCATGGATGACGGTCGCTTG
ACGGATGCCAAAGGTCGCACAGTAGACTTCAAGAATACACTACTGATCATGACTTCCAACATCGGCTCGCGAGTCATCGA
AAAAGGTGGTGGTGGTATAGGTTTCGAGATTGCTGATAGTCAAAGTGAGTCTAGCTACAATCACATTCGCAATCTAGTGA
ATGAAGACCTCAAGCAACACTTCCGCCCTGAGTTCCTCAACCGCGTAGACGATATCATTGTCTTCCGTCAGTTGAGCAAA
GCAGAAGTCACACAAATCGCCGATATTCTGTTACGCGAAGTTTCCACACGCTTAGTAGAACAAGGAATCGAGCTTGAAGT
GACCGCTAAGTTCAAAGATCGCGTAGTCCAAGAAGGCTACAACCCCAGCTACGGTGCAAGACCATTACGTCGCGCCATCA
TGCGACTACTTGAAGACAGCCTAGCTGAAGCAATGTTAGCAGGTTCAATCAAAGTTGGAGACACAGCGATCGTTGACATT
GACGATCGCGGCGAAGTCAAGGTAGAAAAAGTAGCAAACAAAGAGTTGTTACTATCTTCCGTCAGCTAA

Protein sequence :
MFEYFTDKAIKVIMLSQEETRRLGHNLVGTEQILLGLIGEGTGVAAKVLTELGVSLQDARTEVEKIIGRGNRFVPAELPF
TPKVKRVFEQALAEARQLGNNYIDTEHILLGLLREGDGVAAKVLSNLGIHPEQIRTAVIKKHGEVAAVSVGNTDRRSGRT
ASKTATLDEFSTNLTKLAAEGKLDPVVGREKEIERAIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNQNVPDILED
RQVVSLDMGLLIAGTRFRGDFEERIKAIMEEIRAAGNIILVIDEIHTLIGTGGVEGGMDAANILKPALARGELQCLGATT
LDEYRKHIERDAALERRFQPIMVGEPSVDETIEILHGLRATYEQHHRVKITDVALEAAAKLSDRYISDRFLPDKAIDLID
EAGSRVRLRNSQASVTSEVKRELVQVSRAKEAAVRAQDFDKAGQLRDRELELEAQIKAIAENQNKDVNTPVVDEEDIAQI
VASWTGVPVNKLTETESELLLHLEDTLHQRIIGQQEAVTAVSRAIRRARVGLKSPDRPIASFIFSGPTGVGKTELTKALA
SYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYDEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIMDDGRL
TDAKGRTVDFKNTLLIMTSNIGSRVIEKGGGGIGFEIADSQSESSYNHIRNLVNEDLKQHFRPEFLNRVDDIIVFRQLSK
AEVTQIADILLREVSTRLVEQGIELEVTAKFKDRVVQEGYNPSYGARPLRRAIMRLLEDSLAEAMLAGSIKVGDTAIVDI
DDRGEVKVEKVANKELLLSSVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glo7428_4537 YP_007130135.1 ATPase AAA-2 domain protein VFG0079 Protein 0.0 57
Glo7428_4537 YP_007130135.1 ATPase AAA-2 domain protein VFG0080 Protein 4e-153 51