Gene Information

Name : Glo7428_3990 (Glo7428_3990)
Accession : YP_007129604.1
Strain : Gloeocapsa sp. PCC 7428
Genome accession: NC_019745
Putative virulence/resistance : Virulence
Product : transport system permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4449388 - 4450431 bp
Length : 1044 bp
Strand : -
Note : PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: ana:all2585 iron(III) dicitrate transport system permease protein; PFAM: Bacterial transport system permease protein; SPTR

DNA sequence : 
ATGAAGCAAAATACACTACAATTTCGTTCGCGATCGCTACCGCTATCGCTGCGCGTCAAGCAACGCGTTTTGACTGTATT
GTTACTGTTGTTACTTGTGACGCTAATCGCAATGATTGCTAGCGTTGCGTACGGGGAATATCCGATCCCGCCCCTTGCAG
TTATTCAAACTGTGTTAGGGCTAGAAGAAAACTCTGACTATGCATTTGTCATCAACACGCTGCGATTACCGAGGACTTTA
GTTGCAAGTTTAGTAGGACTAGCCTTAGCAATTTCTGGTGCAATTATGCAAGGAATCACGCGTAACCCACTTGCCGATCC
TGGGATCATTGGCGTTAATGCTGGCGCGAGTTTAGCGGCGGTGAGTTTGATTGTATTATTTCCTAGTGTTCCTGTAGGAT
TCTTGCCCATCTCTGCATTTGGCGGTGCTTTGGCGGTTTCGTTGCTCATTTACTTTTTAGCATGGGAAGGAGGCAGTTCG
CCGTTGCGGTTGATTTTAATCGGTGTCGGAATTGCGACGGTCATTGGTGCTTGCACAAGTGTAATTACGACTTTTGGTGA
GATTAACAGCGTCAGTCAAGCTTTAGTTTGGTTAGCAGGTAGTGTTTACGGACGCAGTTGGGAGCAGGTTTTTGCTTTTT
TACCCTGGCTTATTGTATTTCTGCCGCTTGCTTTAGTCAAAACTCGCCAACTCAACGCTTTAGCTTTAGGTGACGAAATT
GCGACAGGATTAGGCTGTCACATTGAGTGGCAACGCGGCTGGTTGTTGCTTATCAGTACCGCACTCGCTGGATCTGCGGT
AGCAACCGCTGGCGCGATTGGTTTTGTGGGTTTAATGGCTCCGCATATGGCACGTCAGTTAGTAGGTGCGACTCATGGCG
GGCTACTTCCCGTTGCTGGCGTGATGGGGGCGATGCTTGTTGTTGTCGCAGATTTAATCGGACGTACGCTATTTGCCCCG
ATTGAAATTCCCTGTGGGATTGTCACTGCGGTCATTGGTGCGCCTTACTTTGTTTATTTGTTGGTGCAGCAGCGTGGCAA
GTAA

Protein sequence : 
MKQNTLQFRSRSLPLSLRVKQRVLTVLLLLLLVTLIAMIASVAYGEYPIPPLAVIQTVLGLEENSDYAFVINTLRLPRTL
VASLVGLALAISGAIMQGITRNPLADPGIIGVNAGASLAAVSLIVLFPSVPVGFLPISAFGGALAVSLLIYFLAWEGGSS
PLRLILIGVGIATVIGACTSVITTFGEINSVSQALVWLAGSVYGRSWEQVFAFLPWLIVFLPLALVKTRQLNALALGDEI
ATGLGCHIEWQRGWLLLISTALAGSAVATAGAIGFVGLMAPHMARQLVGATHGGLLPVAGVMGAMLVVVADLIGRTLFAP
IEIPCGIVTAVIGAPYFVYLLVQQRGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 5e-38 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glo7428_3990 YP_007129604.1 transport system permease protein BAC0163 Protein 3e-38 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glo7428_3990 YP_007129604.1 transport system permease protein VFG1043 Protein 3e-38 45
Glo7428_3990 YP_007129604.1 transport system permease protein VFG0926 Protein 7e-21 42