|
Name : Glo7428_0348 (Glo7428_0348) Accession : YP_007126112.1 Strain : Gloeocapsa sp. PCC 7428 Genome accession: NC_019745 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 387187 - 389187 bp Length : 2001 bp Strand : + Note : PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein; COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831:IPR001482:IPR003593; KEGG: ana:all2444 general secretion pathway protein E DNA sequence : ATGACCTACTCCCCCTCACAGCGGCGTGCCCTGATCGTCAAAAATGACTTTTCTCCTTTCGGCAATAAGGTGATTGAGTC GGGGTATGTCAGCAATGAACAGATGCAGCAAGCTCTGAGCGAAAGTCGTAAATCAAAAAGACCTATTATTGAAGTTTTAG AATCGCTGACTGGACGTCAACTATCACCCGACTTACTAAGGTTTTACAAAAAACAGCAACTTTTTGAACTCAAAATTGTT TACGGGGTTGAATTTATCGACCCTGAGATTAATCAAATCGCTACCAATCAAGTTGCGAATTTAATCGACACGCTGATTCC GGTGGATATTTGCCGCCGTTTTCAATTAATTCCTTTATCGCAAACTGCTGATCCTCCTTCAGTGTTAGTCGCGATGGTCG ATCCTGACCATCTTGAAGCGCAGGATAATTTGACTCGAATTCTCCGTCCCAAGAGCTTAGGATGGCAACGCATCGGGATT ACACAAGAAGACTTTCAACAGTTGCTGGCGAAATACCTCGATGCCCAAGTCGAACAGCAAAAACAGCGAGAAATTCAAAA ATCAGTTGATGTTCAATCAGAAATCGAAGGTTTAGAAGGCTTTGATTTACAAAATGCTAACGATGAAATTGAAGCCGATT TAGGCGCAGCGATTCAAAATGCTGAAGCAGCACCTGTCATTGCTTTAGTCAATAAAATTCTTGTTAAGGCGCTGCAAGAA AAAGTTTCAGACATTCACATCGAACCGCAAGAAGAACATCTCCGAATTCGCTTTCGCAAGGATGGCGTTTTACGTCAAGC GTTCGAGCCATTACCTAAGAAAATTGTTGCTGCGGTTGTCGCGCGTTTTAAAATTATTTCTGAATTGGACATCGCTGAAC GAAGGATGCCCCAAGATGGACGAATTCGGCGCGTATTTGAAGGACGTAAAGTAGACTTTCGCGTTAGTACGCTACCGAGT CGTTACGGTGAGAAGGTTGTCTTACGAATTTTAGATAACTCAGCAACTCAACTTGGTTTAGATAAGCTGATCAGTGATGA AGAAAGTTTACAGATCGTCCGTGAAATGGCGAGTCGTCCGTTTGGATTACTGTTAGTGACAGGACCAACAGGTTCGGGAA AATCAACAACTTTGTATTCGATCTTGGCAGAACGTAACGAACCAGGAGTCAATATTAGTACCGCTGAAGATCCGATTGAG TATTCGTTACCAGGAATTACTCAAGTACAAGTCATTCGCGATAAAGGGATGGATTTTGCCTCGATTTTGCGGTCATTTTT GCGGCAAGATCCTGATGTAATTCTTGTCGGTGAGACGCGCGATCGCGAAACCGCTAAAACCGCAATTGAAGCCGCACTGA CAGGACACTTAGTATTGACAACACTTCATACAAATGACGCCGCAGGTGCGATCGCTCGCCTAGATGAAATGGGTGTTGAG CCTTTTATGGTATCAGGAGCCTTACTCGGTGTTGTTGCTCAGCGTTTGGTGAGGCGTGTCTGTTCAACGTGTCGCATTCC CTATACGCCTTCTTCTACCGAATTAGCGCGCTTTGGCTTAACAAGTTCGCAAGACAGCGGTGTCACTTTTTATAAAGCGA AAACTCTACAGCCTGAAGAAGTAGCAATTGCGAAGAGTCAAGGTGAACTTTGTCCTGACTGTAACGGCGTTGGTTACAAA GGACGTTGTGGGGTGTATGAAGTGATGCGGATTAATCAACGGCTGCAAACTTTAATTACCGAAGGCGCACCCACCGAACG CATCAAAGAAGTCGCGGTGGAAGATGGGATGAAAACGCTACTGTCTTATAGCCTTGACCTTGTGCGGCGAGGTTTGACCA CACTCGAAGAAGTTGAACGCGTTACCTTTACAGATTCTGGTTTAGAAGCAGAACTCAAAGCCAAACGCAAGAGTTCTTTA GAATGTCGGACTTGTAACGCAGAGTTACAACCAGAGTGGCTAGAATGTCCCTACTGTATGACACCGCGTTTTCAAGATTG A Protein sequence : MTYSPSQRRALIVKNDFSPFGNKVIESGYVSNEQMQQALSESRKSKRPIIEVLESLTGRQLSPDLLRFYKKQQLFELKIV YGVEFIDPEINQIATNQVANLIDTLIPVDICRRFQLIPLSQTADPPSVLVAMVDPDHLEAQDNLTRILRPKSLGWQRIGI TQEDFQQLLAKYLDAQVEQQKQREIQKSVDVQSEIEGLEGFDLQNANDEIEADLGAAIQNAEAAPVIALVNKILVKALQE KVSDIHIEPQEEHLRIRFRKDGVLRQAFEPLPKKIVAAVVARFKIISELDIAERRMPQDGRIRRVFEGRKVDFRVSTLPS RYGEKVVLRILDNSATQLGLDKLISDEESLQIVREMASRPFGLLLVTGPTGSGKSTTLYSILAERNEPGVNISTAEDPIE YSLPGITQVQVIRDKGMDFASILRSFLRQDPDVILVGETRDRETAKTAIEAALTGHLVLTTLHTNDAAGAIARLDEMGVE PFMVSGALLGVVAQRLVRRVCSTCRIPYTPSSTELARFGLTSSQDSGVTFYKAKTLQPEEVAIAKSQGELCPDCNGVGYK GRCGVYEVMRINQRLQTLITEGAPTERIKEVAVEDGMKTLLSYSLDLVRRGLTTLEEVERVTFTDSGLEAELKAKRKSSL ECRTCNAELQPEWLECPYCMTPRFQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-70 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-70 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Glo7428_0348 | YP_007126112.1 | type II secretion system protein E | VFG0182 | Protein | 5e-75 | 43 |
| Glo7428_0348 | YP_007126112.1 | type II secretion system protein E | VFG2048 | Protein | 1e-70 | 42 |
