Gene Information

Name : Glo7428_2705 (Glo7428_2705)
Accession : YP_007128366.1
Strain : Gloeocapsa sp. PCC 7428
Genome accession: NC_019745
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3023076 - 3025553 bp
Length : 2478 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; UvrB/uvrC motif; ATPase family associated with various cellular activities (AAA); COGs: COG0542 ATPase with chaperone activity ATP-binding subunit

DNA sequence :
ATGTTTGAACGCTTCACAGAAAAAGCTATTAAAGTGATCATGCTGGCCCAGGAAGAAGCTCGCCGCCTGGGTCACAACTT
CGTAGGTACAGAGCAGATCCTCCTGGGTCTGATAGGGGAAGGGACAGGTGTAGCGGCTAAAGTGCTGAAATCTATGGGCG
TCAACCTTAAAGACGCTCGGATTGAGGTAGAAAAAATTATTGGTCGAGGCTCCGGCTTTGTGGCAGTGGAAATTCCGTTT
ACCCCACGGGCAAAGCGAGTTTTGGAACTTTCTCTAGAAGAAGCACGCCAGCTAGGACATAACTATATTGGTACCGAGCA
CTTGCTACTAGGCTTAATCCGCGAAGGAGAAGGCGTTGCAGCAAGAGTACTAGAAAACTTAGGAGTTGATTTATCTAAAG
TACGCACGCAAGTGATTCGGATGTTGGGAGAAACCGCTGAGGTATCAGCCGGATCTTCGCAATCTGGTCGCACTAAAACT
CCAACACTCGATGAGTTTGGCTCGAACCTAACTCAAATGGCTGCCGAGGGTAAACTCGATCCTGTTGTTGGTCGTGCAAA
AGAAATCGAGCGAGTTATTCAAATTTTAGGTCGTCGTACCAAGAATAATCCAGTATTAATCGGAGAACCTGGTGTAGGTA
AAACCGCGATCGCCGAAGGTTTGGCGTCACGGATTGCCAACAAAGACATTCCCGATATCCTCGAAGAAAAGCGCGTCGTC
ACCCTCGATATCGGCTTGCTCGTTGCAGGTACAAAGTATCGTGGTGAATTTGAAGAACGCCTAAAGAAAATCATGGATGA
AATCCGTTCGGCAGGGAACGTGATTTTGGTGATTGACGAGGTGCATACGCTGATTGGTGCGGGTGCGGCTGAAGGTGCGA
TCGACGCAGCAAACATCCTCAAACCTGCTTTGGCAAGAGGTGAATTGCAGTGTATCGGTGCAACAACACTCGATGAATAC
CGCAAACACATCGAGCGCGACGCCGCCCTCGAACGCAGATTCCAACCCGTGATGGTGGGCGAACCTTCGGTAGACGAAAC
AATCGAAATTTTGTATGGTCTACGCGAACGTTACGAGCAACACCACAAGCTGAAAATCTCGGATGAAGCACTTGTTGCAG
CGGCAAAACTTTCCGACCGTTATATCAGCGATCGCTACTTACCAGATAAAGCCATCGACTTGATTGACGAAGCAGGTTCC
AGAGTCCGTTTAATTAACTCGCAACTGCCTCCCGCAGCAAAAGAGTTAGATAAAGAACTGCGTCAAGTTCTTAAAGAAAA
AGACGATGCGGTAAGATCGCAAGACTTCGACCGCGCGGGCGAACTCCGCGATCGCGAGATGGAAATCAAAGCCGAAATTC
GGGCGATCGCGCAAAGCAAAACCACCAGCACCCGTGAGGGAGAAAATGATTCTCCAGTGGTGACTGAGGAAGATATCGCG
CAAATCGTTGCTTCTTGGACAGGCGTACCTGTTAATAAACTCACCGAAACCGAATCCGAGAAACTGTTGCACATGGAAGA
CACCTTGCATCAGCGACTCATCGGTCAAGAAGATGCTGTTAAAGCAGTTTCCAAGGCAATTCGGCGGGCAAGAGTTGGCT
TAAAAAACCCCAACCGTCCGATTGCAAGCTTTGTCTTCTCTGGACCTACAGGCGTAGGTAAAACCGAGTTAACGAAGGCG
TTAGCCGCTTACTTCTTTGGTTCCGAAGAAGCGATGATCCGCTTGGATATGTCGGAATACATGGAACGCCACACCGTGAG
TAAACTCATCGGTTCGCCTCCAGGATACGTTGGCTACAACGAAGGCGGCCAGTTAACCGAAGCCGTACGCCGCAGACCCT
ACACTGTTGTGCTATTCGACGAAATCGAAAAAGCACATCCCGATGTCTTCAATATGCTGCTGCAAATTCTTGAAGACGGT
CGCTTAACCGATGCGAAAGGTCGCACCGTAGACTTTAAGAATACGTTGCTGATCTTGACCTCGAACATTGGTTCTAAGGT
GATTGAAAAAGGTGGCGGTGGTTTAGGCTTTGAATTTGCTGAGAACCAAGCCGAAGCGCAATACAATCGCATTCGTTCCT
TGGTCAACGAAGAACTCAAACAATACTTCCGTCCAGAGTTCTTGAACCGCTTGGATGAGATTATTGTCTTCCGTCAATTA
ACCAAAGACGAAGTCAAGCAAATCTCCGATATCCTCCTCAAAGAAGTGTTTGTGCGCTTAACCGAGAAGGGTATTACGCT
AGAAGTCACTGATCGCTTCAAGGAGCGCTTAGTAGAAGAAGGATACAATCCGAGCTACGGTGCAAGACCATTACGCCGAG
CCATTATGCGTTTACTTGAAGATAGTCTTGCAGAAGAGATTTTGTCGGGACGCATCAAGGACGGTGACACAGCGGTTGTT
GATGTCGATGACACAGGTAACGTCAAAGTGCTTGCTGAACAGCGACGGGAATTGTTACCTCAAGCTGTCGAGCAGTAA

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVSAGSSQSGRTKT
PTLDEFGSNLTQMAAEGKLDPVVGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDIPDILEEKRVV
TLDIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY
RKHIERDAALERRFQPVMVGEPSVDETIEILYGLRERYEQHHKLKISDEALVAAAKLSDRYISDRYLPDKAIDLIDEAGS
RVRLINSQLPPAAKELDKELRQVLKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIAQSKTTSTREGENDSPVVTEEDIA
QIVASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSKAIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKA
LAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDG
RLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGGGLGFEFAENQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQL
TKDEVKQISDILLKEVFVRLTEKGITLEVTDRFKERLVEEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRIKDGDTAVV
DVDDTGNVKVLAEQRRELLPQAVEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glo7428_2705 YP_007128366.1 ATPase AAA-2 domain protein VFG0079 Protein 0.0 61
Glo7428_2705 YP_007128366.1 ATPase AAA-2 domain protein VFG0080 Protein 5e-156 54