Gene Information

Name : Mic7113_0775 (Mic7113_0775)
Accession : YP_007120091.1
Strain : Microcoleus sp. PCC 7113
Genome accession: NC_019738
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 881971 - 884454 bp
Length : 2484 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; UvrB/uvrC motif; ATPase family associated with various cellular activities (AAA)

DNA sequence :
ATGTTTGAACGTTTCACAGATAGAGCCATCAAAGCTATTATGCTCGCCCAGGAAGAAGCTCGTCGCCTGGGACACAACCT
CGTGGGAACCGAGCAAATTCTCTTGGGGTTGCTAGGTGAAGGCAAAGGTATTGCCAGTATTGTCCTCAATAATTTTGGCA
TTACCCTGGAATCGGCACGGGCAGAGGTCGAGAATTTGATTGGACGCGGGTATCGAGCTGTCCCGGCACAACTCCCCTTT
ACTCCTAAAGCCAAGCGCATTTTCGATCAATCGTTCAAAGAGGCTCGTCAACTCGGACATAACTATATTGGTACGGAACA
TTTATTGTTGGCAATCACCCATGACGAAGAAGGTGTTGCTGCCAAAGTGATTGAAAACCTAGACGTTGACTTGGGTGATG
TTCGCAGCGCCGTGATTAAAGCGATGGGAGAAGTCGCTGCTGCTGCCAAAACGAGAAGCCAAGGGTCTTCGCTGTTTGGA
GAAACTCCAACTAAAAAGGCGAGTTTGGAAGAGTTTGGTCGGAATCTGACTCAGCTAGCCTTAGAAGGCAAGCTTGACCC
GGTTGTGGGTCGTGCCAAGGAAATTGAACGGGTAATTCAGATTTTGGGTCGTCGCACGAAGAATAACCCAGTGTTGATTG
GGGAACCGGGAGTTGGCAAAACGGCGATCGCAGAAGGTCTGGCTCAACGTATTGTGGACAATCATGTCCCCGATTTGTTG
GAAGATAAGCAAGTTTTCACCTTAGATATGGGCTTGCTGCTCTCAGGCACTCGCTATCGAGGAGACTTTGAGGAACGCCT
CAAGCAAATTATGGAGGAAGTGCGTCAATCTGGGAATATCATCTTAGTGATTGACGAAATCCATACCTTGGTTGGTGCTG
GGTCAACCGAAGGCGGCATGGATGCGGCAAATCTCCTCAAACCCGCTCTCGCACGAGGCGAATTGCAGTGCTTGGGAGCC
ACCACGCTTGATGAATACCGGAAGCATATTGAACGGGATGCGGCTTTAGAGCGCCGTTTCCAACCCGTGATGGTAGGAGA
ACCGTCCGTTGAGGACACGATTGAGATTCTGTACGGTCTGCGCGATGCTTACGAGCAGTTCCATAAGGTTAAAATTTCTA
ATCAAGCGCTGGAAGCGGCGGCTAAACTCTCTGACCGCTATATCCAAGACCGCTTCTTGCCAGATAAAGCGATTGACTTG
ATTGATGAAGCCGGAAGCCGTATCCATTTAATCCATTCTGGCCCCTCTCCGGCGGCAAAAGAACTGAAGCAGGAACTGCG
TCGAATTACCCAGAAAAAAGAAGAGGCGGTTAAGGCTCAGAATTTTGACAAAGCCTCACAAATGCGCGATCGCGAGTTAG
AGTTAGAATCTCAACTCCAAGCGATGCTCAACAACGACCAAGAGCAGAATGCTTCCCTCACTCCTACGGTTACAGAGGAA
GACATTGCCCAAATCGTCGCCTCTTGGACGGGGATACCCGTCAACAAGCTTACTGAATCGGAATCAGCGATGCTGTTGCA
CCTGGAAGACACCCTACATCAGCGCCTAGTGGGTCAAGAGGAAGCGGTTGTCGCCGTTTCCCGTGCGATTCGCCGAGCCA
GAGTTGGATTAAAAAATCCCAATCGACCGATCGCCAGCTTTATCTTCTCAGGCCCCACGGGTGTTGGCAAGACTGAACTT
GCGAAAGCGCTAGCGGCCTACTTCTTCGGTTCAGAAGAAGCGATGATTCGGCTGGATATGTCGGAATTCATGGAATCCCA
CACCGTCTCCAAGCTGATTGGTTCCCCTCCGGGATATGTCGGGTATGACGAAGGCGGTCAACTCACGGAAGCCGTTCGAC
GCAAGCCTTACACAGTGCTGCTATTCGACGAAATCGAAAAAGCTCACCCGGATGTCTTCAACATGCTATTGCAACTGTTG
GATGATGGTCGCTTGACCGATGCTCAAGGTCGCACGGTGGACTTTAAGAACACGTTGATTATCATGACCTCTAACATCGG
GTCGAAGGTGATTGAAAAAGGTGGCAGTAGCTTCGGTTTTGAATCCTCCGGCAATGAAGCAGAGTCTCGATACCTCCGCA
TCCGGGATAAGGTGAACGAAGACCTGAAAGGTTACTTCCGTCCTGAGTTCCTCAATCGCCTGGATGAGATTATTGTCTTC
CGTCAGTTGACCAGGGATGAGGTGAAGCAAATCGCTGACCTCATGCTACGAGACATCTCCATCCGCCTGCTTGAGCAAGG
CATCGCCCTAGAAGTCACGGGACGGTTCAAAGACCGTTTAGTGGACGAAGGTTACGACCCTAGCTATGGTGCAAGACCGT
TACGTCGAGCGATTATGCGCCTGCTGGAAGATAGCTTAGCTGAGGCGATGCTATCGGGTCAGGTCAATGATGGCGATACG
GCTGTGATTGATGTTGATGACAAGGGTCAGGTGAAAGTATTACAAAGTCAGCCACAAGAGTTGTTGCTCCAAGGCGTTGG
CTAA

Protein sequence :
MFERFTDRAIKAIMLAQEEARRLGHNLVGTEQILLGLLGEGKGIASIVLNNFGITLESARAEVENLIGRGYRAVPAQLPF
TPKAKRIFDQSFKEARQLGHNYIGTEHLLLAITHDEEGVAAKVIENLDVDLGDVRSAVIKAMGEVAAAAKTRSQGSSLFG
ETPTKKASLEEFGRNLTQLALEGKLDPVVGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIVDNHVPDLL
EDKQVFTLDMGLLLSGTRYRGDFEERLKQIMEEVRQSGNIILVIDEIHTLVGAGSTEGGMDAANLLKPALARGELQCLGA
TTLDEYRKHIERDAALERRFQPVMVGEPSVEDTIEILYGLRDAYEQFHKVKISNQALEAAAKLSDRYIQDRFLPDKAIDL
IDEAGSRIHLIHSGPSPAAKELKQELRRITQKKEEAVKAQNFDKASQMRDRELELESQLQAMLNNDQEQNASLTPTVTEE
DIAQIVASWTGIPVNKLTESESAMLLHLEDTLHQRLVGQEEAVVAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTEL
AKALAAYFFGSEEAMIRLDMSEFMESHTVSKLIGSPPGYVGYDEGGQLTEAVRRKPYTVLLFDEIEKAHPDVFNMLLQLL
DDGRLTDAQGRTVDFKNTLIIMTSNIGSKVIEKGGSSFGFESSGNEAESRYLRIRDKVNEDLKGYFRPEFLNRLDEIIVF
RQLTRDEVKQIADLMLRDISIRLLEQGIALEVTGRFKDRLVDEGYDPSYGARPLRRAIMRLLEDSLAEAMLSGQVNDGDT
AVIDVDDKGQVKVLQSQPQELLLQGVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mic7113_0775 YP_007120091.1 chaperone ATPase VFG0079 Protein 0.0 56
Mic7113_0775 YP_007120091.1 chaperone ATPase VFG0080 Protein 5e-155 53