Gene Information

Name : Mic7113_5847 (Mic7113_5847)
Accession : YP_007124866.1
Strain : Microcoleus sp. PCC 7113
Genome accession: NC_019738
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6832411 - 6834879 bp
Length : 2469 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; UvrB/uvrC motif; ATPase family associated with various cellular activities (AAA)

DNA sequence :
ATGTTTGAACGCTTTACAGAAAAAGCCATTAAGGTGATCATGCTGGCCCAGGAAGAGGCACGTCGCCTGGGGCACAACTT
TGTAGGCACGGAGCAAATCCTTCTGGGTCTTATCGGAGAGGGTACAGGCGTCGCTGCTAAGGTTCTCAAATCGATGGGTG
TTAATCTCAAAGACGCTCGCATCGAAGTAGAGAAAATCATTGGCAGGGGTTCCGGCTTCGTTGCGGTAGAAATTCCGTTT
ACCCCCAGAGCAAAGCGGGTTCTGGAGCTATCGCTCGAAGAGGCTCGCCAGCTGGGGCATAACTATATTGGCACCGAGCA
TTTGCTGCTTGGGTTAATCCGGGAAGGCGAAGGGGTTGCGGCTAGAGTTTTGGAGAACCTAGGCGTAGACCTGACCAAGG
TGAGAACGCAAGTGATTCGGATGCTGGGTGAGACGGCAGAAGTCACGAGTGGAGCCTCTCAGGGTCGTACTAAGACGCCA
ACCCTGGATGAATTTGGCTCGAACCTGACCCAGATGGCAGGTGAAGGAAAGCTTGACCCAGTGGTGGGACGAGCTAAGGA
AATTGAGCGGGTGATCCAGATTTTAGGTCGCCGCACAAAAAATAATCCGGTGTTAATCGGGGAACCAGGGGTTGGGAAAA
CCGCGATCGCAGAAGGGTTAGCCCAACGAATTGCCAACAACGATGTACCCGACATCCTCGAAGAAAAGCGGGTTGTAACT
TTAGATATCGGCTTGTTGGTCGCAGGTACCAAGTATCGGGGTGAATTTGAAGAGCGCCTCAAGAAGATTATGGATGAAAT
TCGTCAGGCTGGGAATGTCATCCTGGTGATTGACGAAGTCCATACGTTGATTGGAGCAGGTGCGGCTGAAGGTGCTATTG
ATGCCGCCAACATCCTCAAACCCGCGCTGGCACGGGGTGAATTACAGTGCATCGGCGCGACAACGCTGGATGAATACCGC
AAACATATTGAACGGGATGCGGCATTAGAGCGTCGTTTCCAACCCGTGATGGTCGGTGAACCTTCTGTGGAAGAAACGAT
TGAAATTCTTTATGGATTGCGCGAACGCTATGAGCAACACCATAAGCTGAAAATCTTGGACAGCGCGTTGGAAGCGGCAG
CGAAGCTTTCGGATCGGTATATTTCTGACCGTTACCTGCCCGATAAAGCGATTGACTTGGTGGATGAGGCAGGTTCGCGA
GTACGCTTGATTAACTCCCAACTGCCACCTGCCGCGAAAGAGTTGGATAAGGAACTGCGTCAGGTTCTTAAGGAAAAGGA
TGATGCAGTGCGATCCCAGGACTTTGACCGGGCTGGAGAATTGCGCGATCGCGAAATGGAAATCAAGGCGGAAATTCGCG
CGATCGCTCAAAGCAAAAAGACAGACGAACGGAGCGACGATCCAGGGCCTGTAGTGGATGAAGAAGATATCGCCCAAATC
GTAGCGTCCTGGACAGGAGTTCCGGTGAATAAGCTCACCGAATCCGAATCTGAGAAGCTGCTGCACATGGAAGACACTCT
ACACCAACGTCTGATTGGTCAAGAGGAAGCGGTGAAAGCGGTAAGCCGTGCGATTCGTCGAGCACGGGTAGGGTTGAAGA
ACCCCAACCGTCCGATTGCCAGCTTTATCTTCTCAGGACCCACCGGTGTGGGTAAGACAGAGTTGGCCAAGTCGTTGGCG
TCTTACTTCTTTGGTTCCGAAGAAGCAATGATTCGTCTGGACATGTCCGAGTACATGGAGCGCCATACGGTTTCTAAACT
AATTGGTTCGCCTCCAGGCTATGTCGGCTACAACGAAGGCGGTCAGCTAACTGAAGCCGTGCGTCGTCGTCCTTACACCG
TGGTGCTATTCGATGAAATCGAAAAAGCTCACCCCGATGTGTTCAACATGCTGTTGCAAATTTTGGAAGACGGGCGTTTG
ACCGATGCCAAGGGTCGGACGGTAGACTTCAAGAACACGCTGTTGATCATGACCTCGAACATCGGTTCTAAGGTGATTGA
GAAAGGTGGTGGTGGTATCGGCTTTGAGTTCAGCGAGAATCAAGCCGAGTCTCAGTACAACCGCATCCGTTCGCTGGTGA
ACGAAGAACTCAAGCAATACTTCCGTCCAGAGTTCCTCAACCGTCTCGATGAGATTATCGTCTTCCGTCAGCTCAACAGA
GACGAGGTGAAGGAAATTGCCGACATCATGCTCAAAGAGGTGTTCGGTCGCTTGAACGAGCAAGGGATCACCCTGGAAGT
CACCGAACGGTTCAAAGACCGCTTGGTGGAAGAAGGATACAACCCGGCTTATGGTGCAAGACCCCTGCGTCGGGCTATTA
TGCGCCTGCTGGAAGATGTCCTAGCGGAGCAAATCCTCGGTGGACACATCAAAGATGGCGATATCGCTACGGTGGATGTT
GATGACAGTGGCACCGTGAAAGTGCTGCCAGGGGAGAAGCGAGAGCTTTTGCCTCAAGCGGTTGAGTAA

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLTKVRTQVIRMLGETAEVTSGASQGRTKTP
TLDEFGSNLTQMAGEGKLDPVVGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDVPDILEEKRVVT
LDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR
KHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKILDSALEAAAKLSDRYISDRYLPDKAIDLVDEAGSR
VRLINSQLPPAAKELDKELRQVLKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIAQSKKTDERSDDPGPVVDEEDIAQI
VASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLA
SYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRL
TDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGIGFEFSENQAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNR
DEVKEIADIMLKEVFGRLNEQGITLEVTERFKDRLVEEGYNPAYGARPLRRAIMRLLEDVLAEQILGGHIKDGDIATVDV
DDSGTVKVLPGEKRELLPQAVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mic7113_5847 YP_007124866.1 chaperone ATPase VFG0079 Protein 0.0 60
Mic7113_5847 YP_007124866.1 chaperone ATPase VFG0080 Protein 1e-152 53