Gene Information

Name : Mic7113_0566 (Mic7113_0566)
Accession : YP_007119888.1
Strain : Microcoleus sp. PCC 7113
Genome accession: NC_019738
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 650412 - 652133 bp
Length : 1722 bp
Strand : -
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain

DNA sequence :
ATGCCCTCCGAGCAGTCCCCACAAGAACCACAAGATCACTCAAACTTAGAAGCAATCCGTGCAGCACGCTTGGAGAAAGT
CCACGAGCTCAAAGCGATCGGGATGAATCCCTATGCCTACCAATGGGCCTCGACTCACCACGCCGCCGAACTCCAGGAAA
AATTTGCCCATTTACCCGATGGCGAAGAAGTTGATCTTGAAGTGGCGATCGCAGGTCGAATCTTAGCACGTCGAGTCTTC
GGAAAACTGGCGTTCTTCAATCTTCAGGACGAAACCGGCACAATTCAGCTATACCTCGATAAGCAGAAAATCACCAGCGG
GATGGCAGATGTGCCCAATGCCTTCAACCACTTGAAGCAACTCACCGACATTGGAGATATTATCGGCGTCAAAGGAACGA
TTAAGCGCACCGAAAAGGGCGAACTCTCGGTTTATGTTAGCCGCTACACCATGCTGACCAAGTCCCTTTTGCCCCTACCC
GATAAATGGCATGGTCTAACGGATACCGAAAAGCGCTACCGCCAACGCTATGTTGACCTGATTGTCAACCCCACTGTGCG
GGAAACTTTCCGTCGTCGTGCCAAAATCACTGCCGCCATTCGCCGCTATCTGGAAGAACAAGACTTTCTAGAAATTGAGA
CGCCAGTGCTTCAATCGGAAGCTGGGGGGGCAGAAGCGCGTCCCTTCATCACTTATCACAATACCCTGGAGATGGATCTG
TACCTACGAATCGCCACCGAGTTGCCTCTGAAGCGACTGGTGGTGGGGGGGTTTGAGAAAGTGTTTGAACTGGGGCGGAT
CTTCCGCAATGAAGGCATCTCCACCCGCCATAACCCTGAATTTACCACCGTTGAGGTTTACCAAGCCTACGCGGATTACA
ATGACATGATGCAGTTGACGGAAAATTTGATTACCACCGCTGCACAAGAGGTCTTAGGCACACTGAAAATTTCCTACCAA
GGTCAAGAAATTGACCTGACACCGCCTTGGCGTAGAATCACCATGCATCAGTTGGTGCAGGAAAAGACCGGTTTAGATTT
TACTCAATTTCAGACCCTGGAAGAGGCCAAAACGGCAGCGCGTCAAGCGGGAATTACAGGTGTGGATGCCTGTTCATCCA
TGGGGAAACTGCTTAACGAATGTTTCGAGCAGAAAGTTGAAGAAACTTTGATTCAACCCACGTTTGTGCTGGATTATCCC
GTGGAAATTTCTCCTCTTGCTAAACCACATCGAGATAAGCCTGATTTAGTCGAGCGCTTTGAGCTATTCATCGTGGGACG
GGAGACGGCGAATAGCTTTTCAGAGTTAACTGACCCCATCGACCAACGCGAACGTCTAGAAGCCCAGGCGGCGCGGAAAG
CCGCAGGTGATTTAGAAGCGCCGGGAGTGGATGAAGACTTTATCACTGCCTTGGAATATGGGATGGCTCCCACGGGCGGC
CTAGGGATAGGAATTGACCGTTTAGTGATGCTATTAACCGATAGTGCCAGTATTCGGGATGTGATTGCATTTCCCCTGCT
CAAAACGTCTAGCCATGTGATTCGCTCCTTTGACTATGACGAAGCGGCTCAAATCTTGCGAGTTGAATTCAACCATGGCA
GCGTCTACCAATATCGAGATGTACCTAAAAGTGTGTACCACGAAATGAAGATTGCACCGTCTGTCGGACAGTACTTTAAT
ACGCATATTCGGGAGAAATACGGTCAGGATCGAGAGATTTAA

Protein sequence :
MPSEQSPQEPQDHSNLEAIRAARLEKVHELKAIGMNPYAYQWASTHHAAELQEKFAHLPDGEEVDLEVAIAGRILARRVF
GKLAFFNLQDETGTIQLYLDKQKITSGMADVPNAFNHLKQLTDIGDIIGVKGTIKRTEKGELSVYVSRYTMLTKSLLPLP
DKWHGLTDTEKRYRQRYVDLIVNPTVRETFRRRAKITAAIRRYLEEQDFLEIETPVLQSEAGGAEARPFITYHNTLEMDL
YLRIATELPLKRLVVGGFEKVFELGRIFRNEGISTRHNPEFTTVEVYQAYADYNDMMQLTENLITTAAQEVLGTLKISYQ
GQEIDLTPPWRRITMHQLVQEKTGLDFTQFQTLEEAKTAARQAGITGVDACSSMGKLLNECFEQKVEETLIQPTFVLDYP
VEISPLAKPHRDKPDLVERFELFIVGRETANSFSELTDPIDQRERLEAQAARKAAGDLEAPGVDEDFITALEYGMAPTGG
LGIGIDRLVMLLTDSASIRDVIAFPLLKTSSHVIRSFDYDEAAQILRVEFNHGSVYQYRDVPKSVYHEMKIAPSVGQYFN
THIREKYGQDREI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-106 50
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 2e-81 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mic7113_0566 YP_007119888.1 lysyl-tRNA synthetase VFG1668 Protein 1e-106 50