Gene Information

Name : Mic7113_5595 (Mic7113_5595)
Accession : YP_007124633.1
Strain : Microcoleus sp. PCC 7113
Genome accession: NC_019738
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6551872 - 6553338 bp
Length : 1467 bp
Strand : +
Note : PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain

DNA sequence :
ATGGACACAGTAAGTAGAAAAACTCTTGACAGAGTAGACGTGTTTATGCGTAAAACCAAAATCATCTGCACTCTTGGGCC
TGCCAGTTCTAACTATGACGCCCTCAAAGCCATGGTTGAAGCTGGGATGAACGTGGTTCGGCTGAACTTCTCTCATGGCG
AACACGCGACCCATCTAGAGTACATCCGCACGGTTCGTAAAGTTGCTGCTGACCTCAAACGCCCCATCGCCATTCTTCAA
GATTTACAAGGGCCTAAAATCCGCGTTGGGGATATGGAAGATGGCGTCGTTCTCCAAGAGGGTGAGAAGACGACAATCAC
GATGGAGGATATCCTCGGCACAGCACAACGATTTAGTTCAACCTACAAAGGCTTAGCTCAGGATGTGAAAGCTGGGGACG
CAATCCTGCTCAACGATGGCTTACTCAAACTGAGGGTAGAGCAGGTGAGTGGTGAGGAGATTCACTGCACCGTCATCTAC
GGGGGAGAGTTAAAAAGTCATAAGGGAATTAACCTCCCGACCGGTTCAATCTCAGCCCCTCCTCTAACCGATAAGGATAA
AGAGGATTTGATGTTTGGCTTAGAGCAAGGCGTGGATTACGTCGCCTTGTCCTTTGTGCGGAAAGCCTCTGATCTGGAGC
AAGTCCGAGACATTGTGAGAAGCGCGGGTAAATCGACTCACATCGTTGCTAAAGTCGAGCGTCATGAAGCCGTAAACGAC
CTAGAAGGGATTGTTGCTGCTGCCGATGTAATCATGGTGGCGCGTGGAGACTTGGGTGTTGAAATGCTTTTAGAAGAAGT
TCCTCGCATTCAAAAGACCTTAATTGACACCTGCCACAGCTATCAAAAGCCTGTGATTACCGCAACCCAGATGCTGGAGT
CGATGATTCAAAACCCTCGCCCAACCAGGGCTGAGGTTTCTGATGTTGCCAACGCGATTCTGGAGGGTACAGATGCGATT
ATGCTTTCGGGGGAAACCTCAGTGGGTCGCTATCCGGTAGAAGCGGTGAAGACGATGGCGAGTATTGCCGAAACCACCGA
GGATCGTTTGGCGGCGTCTTCGTTGTTCATCAATGGGAAGCGGGAACACACTGTTTCCAACGCGGTTGGGTATGCCGCTT
GCCAACTGGCGCAGAATATTAATGCTAAGGCGATTATCTGCTTCACAGAGCACGGTTTTACCACACGCATTTTGTCTAAA
TATCGCCAGCAGATTCCGGTCGTTGCTGTCACGCCAACCGAAGAAGTGCAACGTCGGCTGACACTTTACTGGGGTGTTCA
GTCTTTACAGTTGCAGGAAGTTCATAACACAGACGCCATGATTATTTTGGCGGAGCAAGCAGCTCTCCAACATGGGTTTG
TGACCAAGGGAGATATTGTGGTGATGATTGCAGGTTTACCTTTAGCCATTACGGGTGTAACGAATTTAATTAAGGCACAC
CGAATTGGGGAACAGGTGGCAGTTTAA

Protein sequence :
MDTVSRKTLDRVDVFMRKTKIICTLGPASSNYDALKAMVEAGMNVVRLNFSHGEHATHLEYIRTVRKVAADLKRPIAILQ
DLQGPKIRVGDMEDGVVLQEGEKTTITMEDILGTAQRFSSTYKGLAQDVKAGDAILLNDGLLKLRVEQVSGEEIHCTVIY
GGELKSHKGINLPTGSISAPPLTDKDKEDLMFGLEQGVDYVALSFVRKASDLEQVRDIVRSAGKSTHIVAKVERHEAVND
LEGIVAAADVIMVARGDLGVEMLLEEVPRIQKTLIDTCHSYQKPVITATQMLESMIQNPRPTRAEVSDVANAILEGTDAI
MLSGETSVGRYPVEAVKTMASIAETTEDRLAASSLFINGKREHTVSNAVGYAACQLAQNINAKAIICFTEHGFTTRILSK
YRQQIPVVAVTPTEEVQRRLTLYWGVQSLQLQEVHNTDAMIILAEQAALQHGFVTKGDIVVMIAGLPLAITGVTNLIKAH
RIGEQVAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-90 45
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-90 45
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-90 45
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 4e-90 45
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 3e-67 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mic7113_5595 YP_007124633.1 pyruvate kinase VFG0479 Protein 5e-91 45