Gene Information

Name : Mic7113_0450 (Mic7113_0450)
Accession : YP_007119775.1
Strain : Microcoleus sp. PCC 7113
Genome accession: NC_019738
Putative virulence/resistance : Virulence
Product : type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 507919 - 509568 bp
Length : 1650 bp
Strand : -
Note : PFAM: Type II/IV secretion system protein

DNA sequence :
ATGCACACGATTTCTGCCTCATTTCCCTCGGCTTGGCAAAAGCTGAGAAATCACGAAATTAGCTGCGAAGAAGCCCTCTC
GCTCTTGGTGGATGACCAAGGGACGGTGAACCGGGAACGGCTGGATCAAGAAGTGACTCACCGATTCTTTCGGCATTTCC
CCGATCGCAATGCCTTACCCCCTGTGATTCCCCTGCTGCTTTGGCGAGGCTGCTACTACCTGGGAAGCCCAGTGACACTA
TCAACACAGACGATTCAAGACCTGAGCGATCGCGCCCTCACCGAAATTAAAGTCATCCCCATCAGCAATAAAAGCTTTCG
CGTCTGGTTTCACACCCAAAACCTCGACCCGAACCGCATTAGTGCTATCCCTTTGGTGAATCCTCTCACGGGGGAACTGG
AAAAAGAGGACATCTCTGAAACCACAGAAGCCTACCTGGCAAAAGCCGTTGACCAGATTGGTAAAATTAAAACCCTGATT
TCCGGGGCATTACGCAACCGCGCCAGCGATCTTCACCTCGAACCCATGCCCGACGGATTGAGAGTCCGCTATCGCATTGA
TGGGGTGTTACGGGATATTACCAAACTCAAACTCGATATCAGCCGTAAGGTAATTGTCGCCCTCAAAGTCATGTCGGGTA
TGGACATTGCAGAAAGTCGCCGTCCTCAAGATGGACGGATTGGCGAAAAGTATGCAGGCAATGAAGATGCCGAATTAGGC
ATGGATATGCGAGTGAGTACCCTCCCCTGTGTGGGTGGCGAAAAAGCGGTGATTCGCTTACTGCCCAGGCAAAATCCTTT
TTCCAAAATTGAAGACTTGGGCTTCTCGGAAAAGACACTGTCCATCTATGCCAGTTGGTTGCAGCAGCCCCAAGGCATGA
TTATCCTCACCGGCCCCACCGGTTCGGGGAAAACCAGTACACTTTACACTAGCCTGCAACACGTCGCCACAGAGCATGTC
AATGTGGTAACCGTAGAAGACCCAGTAGAGTATATCTTACCGGGCATCACCCAAACTCAGGTGCATGAACGTGCCGGAAT
GACCTTTGCGGCAGGATTAAGGTCAATTTTGCGCCAAGACCCCGACATCATTATGGTGGGGGAAATTCGAGATAGTGAAA
CGGCTGAAACCGCTGTACGCGCCGCCTTGACGGGTCATTTGGTATTTACCACACTCCATACCAATGATGCGATTGGTGCG
ATTCCCCGCATTAAAGATATTGGCCCAGACCCGGCTTTAATTAGTGATGCCCTACTCGGAATTGTGGCGCAGCGTTTAGT
GCGTCGGGTTTGTCCCCACTGTGCTCAACCACACACACCGACAGAAAAAGAGTTACAAACACTAGGATTACAGAATCATA
CCAATTTGGGTTCTTGGAAACGAGGCAAGGGCTGTGATAAATGTTTCAATTCCGGCTACTTGGGGCGGGAAGCCATTGTG
GAGTTATTGGATATCGATGACCGGGTACGGGAAATTATCTATGAAGGGACAATGACCCAATTGCATCACTATCTTAAGGA
AATCAAGTTTGCCTCGTTTGGCATAGCGGCAAGACAAAAGGTGACAACGGGTGCAACAACGGTTGAGGAAGTATTGCGAG
TGTTACCCCGAAGTGCATTTTCTCGGAATCAATTTTTAGGAAAAGATTGA

Protein sequence :
MHTISASFPSAWQKLRNHEISCEEALSLLVDDQGTVNRERLDQEVTHRFFRHFPDRNALPPVIPLLLWRGCYYLGSPVTL
STQTIQDLSDRALTEIKVIPISNKSFRVWFHTQNLDPNRISAIPLVNPLTGELEKEDISETTEAYLAKAVDQIGKIKTLI
SGALRNRASDLHLEPMPDGLRVRYRIDGVLRDITKLKLDISRKVIVALKVMSGMDIAESRRPQDGRIGEKYAGNEDAELG
MDMRVSTLPCVGGEKAVIRLLPRQNPFSKIEDLGFSEKTLSIYASWLQQPQGMIILTGPTGSGKTSTLYTSLQHVATEHV
NVVTVEDPVEYILPGITQTQVHERAGMTFAAGLRSILRQDPDIIMVGEIRDSETAETAVRAALTGHLVFTTLHTNDAIGA
IPRIKDIGPDPALISDALLGIVAQRLVRRVCPHCAQPHTPTEKELQTLGLQNHTNLGSWKRGKGCDKCFNSGYLGREAIV
ELLDIDDRVREIIYEGTMTQLHHYLKEIKFASFGIAARQKVTTGATTVEEVLRVLPRSAFSRNQFLGKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 1e-73 43
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 9e-74 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mic7113_0450 YP_007119775.1 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB VFG0182 Protein 5e-79 45
Mic7113_0450 YP_007119775.1 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB VFG2048 Protein 1e-75 43
Mic7113_0450 YP_007119775.1 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB VFG2426 Protein 8e-58 41