Gene Information

Name : Mic7113_0376 (Mic7113_0376)
Accession : YP_007119704.1
Strain : Microcoleus sp. PCC 7113
Genome accession: NC_019738
Putative virulence/resistance : Virulence
Product : Mn2+/Zn2+ ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 427976 - 428863 bp
Length : 888 bp
Strand : +
Note : PFAM: ABC 3 transport family

DNA sequence :
ATGCTCGAAACTCTAATTGAACCGCTGCAATATGGATTCATGCAGCGATCGCTAATAGTTGCCGTTTTGGTTGGTATTGT
CTGCGCTTCGGTTGGCAGCTATTTGATGGTGCAGCGGTTGGCTTTACTGGGAGATGCTATTAGTCATTCGGTGTTACCGG
GACTAGCGATCGCGTTTATTGTGGGTGCCGATATTTTTGTGGGGGCATTTATCGCGGGTGTACTCAGCACGATGGTGATT
ACTTGGATTAGGACGCGATCGCAAATTAAAGAAGATGCGGCAATGGGCATTGTTTTTTCTGCCTTTTTTGCCTTAGGTAT
TACTTTAATTACGGTTGTTCAGAAAGATAATAAAATTGACCTGAATCACTTTCTGTTTGGGAATATCTTGAGTGTTTCGC
CTCAAGAGGTGATTAATACAGCCATCATTACAGTAATTGTTTTAGCCATTGTCGCGCTTTTGTATAAAGAATTAATGTTT
TATACTTTTGACCCGATAGGTGCACAAGCGGCTGGTTTACCTATCAATTTACTAAACTTTGGCTTAATGATTTTGATTGC
TTTGACGATTGTTGCCAGTCTCAAAGCGGTGGGTGTCATCCTAGTCCTAGCCATGCTGATTACTCCAGGAGCAACGGCTT
ACTTATTAGTAAGTCGGTTGCATCAAATGATGATTTTGGGTTCGGTAATTGGGGTTATTGCTAGTATTAGCGGGATGTAC
TTGAGTTATTTTTTCAATCTACCCTCTGGGCCTGCGATCGTTTTAGTTGCCTTTGGCTTTTTTATGTTGGCATTTCTGTT
TAGTCCCAGTCAGGGGGTTTTAACGCATCCGGTTTCTAAGTCTGGTAAGTCACCCATTTGGCGGGAAATTAAGGGATTGT
GGCGTTGA

Protein sequence :
MLETLIEPLQYGFMQRSLIVAVLVGIVCASVGSYLMVQRLALLGDAISHSVLPGLAIAFIVGADIFVGAFIAGVLSTMVI
TWIRTRSQIKEDAAMGIVFSAFFALGITLITVVQKDNKIDLNHFLFGNILSVSPQEVINTAIITVIVLAIVALLYKELMF
YTFDPIGAQAAGLPINLLNFGLMILIALTIVASLKAVGVILVLAMLITPGATAYLLVSRLHQMMILGSVIGVIASISGMY
LSYFFNLPSGPAIVLVAFGFFMLAFLFSPSQGVLTHPVSKSGKSPIWREIKGLWR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 1e-48 44
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 9e-49 44
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-46 42
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-46 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-46 41
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 6e-46 41
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 6e-46 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mic7113_0376 YP_007119704.1 Mn2+/Zn2+ ABC transporter permease BAC0352 Protein 2e-46 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mic7113_0376 YP_007119704.1 Mn2+/Zn2+ ABC transporter permease VFG0528 Protein 1e-46 42