Gene Information

Name : Mic7113_3669 (Mic7113_3669)
Accession : YP_007122795.1
Strain : Microcoleus sp. PCC 7113
Genome accession: NC_019738
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4249640 - 4250323 bp
Length : 684 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGCGAATCCTTTTAGTTGATGATGAAATTGAGCTAACTGAACCACTGAGTCGAGTGTTAAACCGTGAGGGTTACGCGGT
TGATGTGGCTTATGATGGGGCGACGGGAAGTGAGTTAGCGTCCGGCAGCGATTATGACTTGCTGATTTTAGATTGGATGT
TGCCAAAGCTGTCGGGATTGGAACTTTGCCAACAGTTGCGATCGCAAGGGCGAACGACACCGGTGCTTTTCCTCACCGCG
AAAGATACCTTGAATGATCGAGTCGAAGGATTAGACGCCGGTGCTGACGATTATCTGGTTAAACCCTTTGAACTGCGGGA
GTTACTCGCCAGAGTCCGCGCCTTGTTGCGACGTTCGGCGGCAACCGATAGCAGTGCGCCCCAACGTCTGCGGGTTGCCA
ACCTAGAACTGGATTTGGAAAATCAGTTAGCTTATCGCCATGGACGTTTAATTGAACTCTCAGAAAAAGAAAGTCAGTTA
CTCGAATTCTTTATGCGCCACACGGGTCAATTGTTGACCCATGGGCAAATTTATCAGCATCTATGGGCAGAAGATGAACA
ACCCAGTAGTAATGTGGTCGCCGCATTGATTCGTTTATTGCGACGCAAAATTGAGGGCAAAGGTGAAATTCCTCTGATTC
ACACGGTCTATGGGAAAGGCTATCGTTTTGGAGATAGCAGCTAA

Protein sequence : 
MRILLVDDEIELTEPLSRVLNREGYAVDVAYDGATGSELASGSDYDLLILDWMLPKLSGLELCQQLRSQGRTTPVLFLTA
KDTLNDRVEGLDAGADDYLVKPFELRELLARVRALLRRSAATDSSAPQRLRVANLELDLENQLAYRHGRLIELSEKESQL
LEFFMRHTGQLLTHGQIYQHLWAEDEQPSSNVVAALIRLLRRKIEGKGEIPLIHTVYGKGYRFGDSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mic7113_3669 YP_007122795.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 9e-31 47
Mic7113_3669 YP_007122795.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0347 Protein 4e-30 45
Mic7113_3669 YP_007122795.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 3e-31 44
Mic7113_3669 YP_007122795.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0288 Protein 2e-33 43
Mic7113_3669 YP_007122795.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 1e-32 43
Mic7113_3669 YP_007122795.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 3e-28 43
Mic7113_3669 YP_007122795.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 2e-28 43
Mic7113_3669 YP_007122795.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 6e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mic7113_3669 YP_007122795.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 6e-34 45
Mic7113_3669 YP_007122795.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 2e-26 41