Gene Information

Name : Mic7113_0360 (Mic7113_0360)
Accession : YP_007119688.1
Strain : Microcoleus sp. PCC 7113
Genome accession: NC_019738
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 409394 - 411406 bp
Length : 2013 bp
Strand : -
Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain

DNA sequence :
ATGGCCGTTGCAACCCAATCTCTCGAAGAACTGTGCATTAATTCCATCCGCTTTCTAGCCATTGATGCGGTACAGAAAGC
GAATTCTGGTCATCCAGGGCTGCCAATGGGCGCGGCTCCTATGGCATTCGTGCTTTGGGACCGATTTATGCGGTTTAACC
CGAAAAATCCCAAGTGGTTTAATCGCGATCGCTTTGTCTTGTCGGCGGGTCACGGCTGTATGTTACAGTACGCCCTACTC
CACCTGACAGGCTACGATAGCGTGACGCTGGACGACATCAAACAGTTCCGGCAGTGGGGTTCTAAAACCCCTGGACACCC
GGAAAACTTCGAGACACTCGGTGTAGAAGTCACCACAGGCCCATTAGGACAAGGAATTGCCAATGGGGTCGGTTTAGCAA
TGGCAGAAGCCCATTTGGCTGCCAAGTTCAACAAGCCCGATGCCAAGATTGTTGACCACTATACCTATGTGATTCTGGGT
GATGGTTGCAACATGGAAGGGGTTTCTGGTGAAGCCTGTTCCTTGGCAGGACACTTGGGATTGGGCAAGTTAATTGCTCT
ATACGACGACAACCACATTTCCATCGACGGTTCTACGGATGTCTCCTTTACCGAAGATGTAGGGAAGCGGTTTGAAGCTT
ACGGTTGGCACGTTCAACATGTAGAAGATGGTAATAGTGACCTGGACGCGATCGCCAAAGCGATCGAAGCTGCCAAAGCT
GTCACCGACAAGCCTTCCTTGATTAAGGTAACCACCATCATTGGATACGGTTCTCCCAACAAATCCAATACCGCCGACGT
TCACGGTGCAGCTCTCGGTAAGGATGAAGTCAAAGCAACTCGCGAGAACCTGGGTTGGGAATACCCTGAGTTCGAGGTGC
CAGAAGACGCCCTCAAGCACTTCCGGAAGGCGGTAGAACGCGGTGCCAACTTAGAGACCGAATGGGATCAAGCTCTAGCC
GACTACAAAGCCAAGTATCCCGAAGAAGCAGCTGAGTTTGAGCGGTTCGCCAGCAACAAACTCCCCGAAGGATGGGAAAA
AGCTCTCCCCACCTATACTCCAGAAGACAAGGCTCTGGCAACTCGCAAGACTTCGGAAATGACGCTGAACGCTCTGGCTC
CCGTATTGCCAGAACTCATCGGTGGTTCCGCTGACTTGACCCACTCTAACTACACCTTGCTCAAAGGATTTGGTGACTTC
CAAAAAGGACAGTACGCCAACCGTAACCTGCGCTTTGGGGTGCGGGAACATGGCATGGGTTCGATTTGTAACGGGATTGC
CCTGCACAGTTCTGGATTGATTCCCTACTGTGCTACCTTCCTGGTATTTGCCGACTACATGCGGGCGGCGATTCGTCTTT
CTGCCTTGTCGCAAGCGGGAGTCATCTACGTCATGACTCACGACTCCATTGCTTTAGGCGAAGATGGCCCCACCCACCAA
CCCGTGGAAACGATTGCTTCCCTACGAGCCATTCCTAACCTGTTGGTGATTCGTCCGGCTGACGGCAACGAAACCTCTGG
TGCTTACAAGGTGGCTATCCAAGCGGCTAGTGAAAACCGCCCAACTCTAATGGCCTTCTCGCGGCAAAACTTACCGCAAT
TAGCAGGAAGTGGTATTGATCACGTTGCCAAAGGGGCTTACATCCTCTCCGATAGCGAAGGGACACCCGACCTGATCCTC
ATCGGTACCGGTGGCGAAACCTACCTCTGTGTTGACGCAGCTGAGAAGCTACGCGCTGAAGGGAAGAATGTCCGCGTCGT
CTCGATGCCTTGTTGGGAACTGTTCGATGAGCAGGATGAAGCTTACCGTGAATCCGTATTGCCTAAAGCTGTCACTAAGC
GCTTAGCTGTAGAAGCCGCTTCTAGCTTTGGTTGGTGCCGTTACCTGGGTAATGAGGGCGCGATGATTAGCATCGACCGT
TTCGGCGTTTCAGCTCCTGGTGGCGTTGCCCTAGAGAAGTTTGGCTTCACCGTCGATAACGTGGTCGCCAAGGCGAAGGA
ACTCTTAGGGTAA

Protein sequence :
MAVATQSLEELCINSIRFLAIDAVQKANSGHPGLPMGAAPMAFVLWDRFMRFNPKNPKWFNRDRFVLSAGHGCMLQYALL
HLTGYDSVTLDDIKQFRQWGSKTPGHPENFETLGVEVTTGPLGQGIANGVGLAMAEAHLAAKFNKPDAKIVDHYTYVILG
DGCNMEGVSGEACSLAGHLGLGKLIALYDDNHISIDGSTDVSFTEDVGKRFEAYGWHVQHVEDGNSDLDAIAKAIEAAKA
VTDKPSLIKVTTIIGYGSPNKSNTADVHGAALGKDEVKATRENLGWEYPEFEVPEDALKHFRKAVERGANLETEWDQALA
DYKAKYPEEAAEFERFASNKLPEGWEKALPTYTPEDKALATRKTSEMTLNALAPVLPELIGGSADLTHSNYTLLKGFGDF
QKGQYANRNLRFGVREHGMGSICNGIALHSSGLIPYCATFLVFADYMRAAIRLSALSQAGVIYVMTHDSIALGEDGPTHQ
PVETIASLRAIPNLLVIRPADGNETSGAYKVAIQAASENRPTLMAFSRQNLPQLAGSGIDHVAKGAYILSDSEGTPDLIL
IGTGGETYLCVDAAEKLRAEGKNVRVVSMPCWELFDEQDEAYRESVLPKAVTKRLAVEAASSFGWCRYLGNEGAMISIDR
FGVSAPGGVALEKFGFTVDNVVAKAKELLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 1e-150 54
tktA AAO17218.1 TktA Not tested tcd island Protein 4e-154 54