Gene Information

Name : Mic7113_3510 (Mic7113_3510)
Accession : YP_007122641.1
Strain : Microcoleus sp. PCC 7113
Genome accession: NC_019738
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4048671 - 4049345 bp
Length : 675 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGACAACACATATTCTTCTAGTTGAAGATGAAGTTAAACTGGCGCGATTCGTGGAGCTAGAACTCAGTAGTGAAGGCTA
TCACGTAAGTGTTGCACATGATGGAATGTCAGGATTGACCTTGGCACGAGAGTCTGCGCCAGATTTAGCTATTTTAGATT
GGATGCTGCCAGGGTTAACTGGGGTGGAACTCTGTCGCCGTCTCAGGGCAACGGGTAACAAAGTGCCAGTCATTTTGTTG
ACGGCAAAGGATGAGGTGAGCGATCGCGTTGCCGGTTTGGACGCTGGGGCTGATGACTATGTGGTCAAACCCTTTAGTAT
TGAGGAACTTCTTGCCAGAATTCGCGCCCACTTGCGCCGCACCCAAGAAATTAATGAGGATATTTTGCAGTTTGACGATT
TGAGCCTGAATCGTCGGACTCGTGAGGTATTTCGAGGCAAACGAGCGATCGAATTAACGGCGAAAGAGTTTGATTTATTG
GAGTATCTTCTCACAAATCCCCGTCAGGTGTTCACTAGAGACCAAATTTTAGAACGTGTCTGGGGTTATGACTTCCTTGG
AGATTCCAACATCATTGAGGTCTATATCCGTTATCTACGCCTGAAGCTGGAAGAAAACAACGAAAAGCGGTTGATTCACA
CAGTACGCGGTGTGGGATATGCATTGCGGGAGTAA

Protein sequence :
MTTHILLVEDEVKLARFVELELSSEGYHVSVAHDGMSGLTLARESAPDLAILDWMLPGLTGVELCRRLRATGNKVPVILL
TAKDEVSDRVAGLDAGADDYVVKPFSIEELLARIRAHLRRTQEINEDILQFDDLSLNRRTREVFRGKRAIELTAKEFDLL
EYLLTNPRQVFTRDQILERVWGYDFLGDSNIIEVYIRYLRLKLEENNEKRLIHTVRGVGYALRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-35 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-34 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 7e-49 50
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 7e-49 50
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 7e-49 50
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 7e-49 50
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 7e-49 50
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 7e-49 50
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 3e-45 50
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 7e-49 50
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 7e-49 50
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 1e-45 48
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 5e-40 46
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 2e-40 46
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 4e-42 45
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 6e-42 45
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 6e-42 45
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 6e-42 45
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 6e-42 45
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 4e-42 45
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 6e-42 45
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 6e-42 45
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 6e-42 45
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 9e-41 45
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 8e-42 44
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0347 Protein 3e-38 44
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 8e-39 44
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 4e-40 44
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 2e-36 44
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 1e-33 44
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 8e-44 42
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 2e-36 41
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene5135. Protein 5e-18 41
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0288 Protein 1e-33 41
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3671. Protein 8e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 3e-54 55
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 6e-40 47
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 2e-35 46
Mic7113_3510 YP_007122641.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1386 Protein 3e-45 45