Gene Information

Name : Mic7113_3160 (Mic7113_3160)
Accession : YP_007122308.1
Strain : Microcoleus sp. PCC 7113
Genome accession: NC_019738
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3636611 - 3637384 bp
Length : 774 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGAGTGCTGCTAGAACTGACTCAATGTTGTTTACGAAAAAACGAGGCCTGGGTGATTTCAGCTCAATTGGGTTAAACCG
CCCTGACAGGGGAACTATCCTTGCCAAGGGGGTAGAAATGGTATATCAGTCAGGGCAACGGCGCTTTCAGGCTCTTAAAG
CGGTTGATTGGGAAATCGCAAGTGGTGATATCCAAATCTTAATGGGGCCATCGGGTTCTGGGAAAACGACTCTTCTCTCT
ATTTTGGCGGGACTACTGACCCCTTCTGCGGGACAGGTATACTTACTTGGAGAAGAGATTACCCAGATGTCTCGCTCCAA
GCTGGCTCACTTTAGACGGCAAAACATTGGCTTTATTTTTCAGAACTTTAACCTATTTCCAGCGCTGAGTGCCGCTGAAA
ATGTAGAGGTTGTACTCAATATCAAAGGCATTAAGGGCAAAAAAGCACGCTATCAAGCGCAAGTTCTCTTAGAACAGGTT
GGGTTAGGGTTTCAAGCCAATCAAAAACCGGCTGATTTATCCGGAGGACAGAAACAACGGGTTGCGATCGCTCGCGCCTT
AGCCGGCAACCCGCAAATCATCATGGCGGATGAACCAACCGCTGCCTTAGACTCCCATAGTGGACATAAGGTGATTGAAC
TGCTGCGTCGGTTGGCGAAAGAAGGCGGTTGCACGGTGCTGATGGTAACACACGACCCGCGCATTATCGATGTTGCCGAT
CGCGTCACTTATCTGGAAGATGGCATATTAAGGGATGGCACGACGTTGCAGTAG

Protein sequence :
MSAARTDSMLFTKKRGLGDFSSIGLNRPDRGTILAKGVEMVYQSGQRRFQALKAVDWEIASGDIQILMGPSGSGKTTLLS
ILAGLLTPSAGQVYLLGEEITQMSRSKLAHFRRQNIGFIFQNFNLFPALSAAENVEVVLNIKGIKGKKARYQAQVLLEQV
GLGFQANQKPADLSGGQKQRVAIARALAGNPQIIMADEPTAALDSHSGHKVIELLRRLAKEGGCTVLMVTHDPRIIDVAD
RVTYLEDGILRDGTTLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-35 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-36 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-36 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mic7113_3160 YP_007122308.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 7e-42 45
Mic7113_3160 YP_007122308.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-34 44
Mic7113_3160 YP_007122308.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 5e-36 41
Mic7113_3160 YP_007122308.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 7e-32 41