Gene Information

Name : Mic7113_2182 (Mic7113_2182)
Accession : YP_007121403.1
Strain : Microcoleus sp. PCC 7113
Genome accession: NC_019738
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2489765 - 2492392 bp
Length : 2628 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA)

DNA sequence :
ATGCAACCCACTAATCCTAACCAATTTACAGAAAAAGCCTGGGAAGCCATAGCACGTACCCCAGATATTGCCAAAGCCGC
TCAACAACAACAACTCGAAAGCGAACATTTGCTCAAAGCGCTGTTGGAGCAAGATGGACTTGCCAATAGCATTTTTAATA
AACTTGAAGTACCTGTGCAGCGAGTGCGCGAGGCAACGGAAAGCTTTAGCCAGCGACAGCCTAAGGTTTCTGGCAGTAGT
GGCTCAGTCTATCTCGGACGCAGCCTGGATGCTCTGTTAGATCGAGCAGAATCTTATCGCAAAGACTACAAAGATGAGTT
CATCTCGATCGAGCATCTGATCTTGGCGTATCTTAAAGACGATCGCTTTGGTAAGAGCTTATTCCAAGAATTTAAACTAG
ATGAGAAAAAGCTCAAGAACGCGATTGACCAAATTCGAGGGAATCAGAAAGTGACCGACCAAAACCCAGAAGGCAAATAC
GAAGCACTGGAAAAATATGGACGCGATTTAACTCAAGCGGCTCGTGAAGGGAAACTCGACCCGGTGATTGGGCGGGATGA
TGAGATTCGCCGCACCATACAGATTCTCTCACGTCGCACCAAAAATAATCCAGTGCTGATTGGGGAACCTGGAGTCGGTA
AAACTGCGATCGCAGAAGGGTTGGCGCAGCGGATTGTTGCTGGTGATGTGCCCGAATCTCTCAAAGACCGCAAATTAATT
GCGCTGGATATGGGTGCACTCATTGCCGGTGCTAAGTTCCGGGGCGAATTTGAAGAACGTCTGAAAGCCGTACTCAAAGA
AGTCACTGACTCTCGCGGTCAACTTATCCTATTTATAGATGAAATTCACACCGTTGTTGGTGCGGGTGCGACTCAAGGCG
CGATGGATGCAGGCAACTTGCTCAAACCCATGTTGGCGCGTGGTGAGTTGCGGTGTATCGGTGCCACTACCCTGGATGAG
TACCGCAAGTACATTGAGAAAGATGCAGCATTGGAACGTCGATTCCAGCAGGTTTATGTGGATCAACCCAGTGTAGAAGA
TACGATCTCGATTCTGCGGGGACTCAAAGAGCGTTATGAACTGCACCACGGGGTGAAGATTTCGGATAGTTCACTTGTTG
CCGCCGCCACGCTATCCACTCGATATATTAGCGATCGCTTCCTCCCCGATAAAGCGATTGACTTAGTGGATGAAGCGGCT
GCACGGCTGAAAATGGAGATTACCTCCAAGCCAGAAGAACTCGATGAAATTAACCGCAAAATCCTCCAGTTGGAGATGGA
ACGGTTGTCGCTGCAAAAAGAAAGCGATCGCGCCTCCGTTGAACGCCTGGAACGACTGGAAAAAGAACTCGCCAACCTCA
AAGAAGAGCAACGCACTTTAAATGCTCAGTGGCAGTCCGAAAAAGACGTACTCAACCACATTCAGAGTATTAAAGAAGAG
ATTGACCGAGTCAATGTGGAAATCAGCCAAGCCGAGCGTGATTACGACCTGAACAAGGCGGCTGAGTTAAAATATGGCAA
ATTATCCCAGTTGCAAAAATCGCTGCAAGAGGCAGAAACCCAACTCGCGGCGACCCAAACCAGTGGCAAATCCCTGCTGC
GGGAGGAAGTCACAGAATCCGACATTGCCGAAATTATCTCCAAGTGGACGGGCATTCCCATCAGCAAGCTGGTGGAATCG
GAGAAAGAAAAGTTACTCCACCTCGAAGATGAACTGCACCAGCGGGTTGTGGGACAGGATGAAGCGGTTACAGCCGTTGC
CGATGCGATTCAGCGATCGCGTGCGGGTTTATCTGACCCCAATCGTCCTACCGCTAGCTTTATCTTCCTTGGCCCCACGG
GTGTTGGCAAGACGGAACTGGCAAAAGCGCTAGCCTCTTACCTGTTCGATACGGAAGATGCTTTAGTGCGGATTGATATG
TCCGAATATATGGAAAAGCACGCCGTCTCCCGCCTGATTGGTGCACCTCCGGGATATGTGGGTTACGAAGAAGGGGGTCA
GTTGACCGAATCGATCCGTCGTCGTCCCTATGCGGTGATTCTGTTCGACGAAATCGAGAAAGCGCATCCCGATGTGTTCA
ACGTGATGCTGCAAATCCTGGATGATGGTCGCGTTACGGATGCTCAAGGTCACACGGTAGACTTCAAGAATACTGTGATT
ATCATGACCAGCAATGTCGGTTCGCAGTACATTCTAGACCTTGCCACCGAGGACAGTCAGTACGATGAAATGCGGAGTCG
GGTAATGGAGGCGATGCGATCGAGTTTCCGTCCAGAGTTCCTCAACCGAATTGATGAGATTATTATCTTCCACTCCTTGC
AGAAACATCAATTGCGCCATATTGTTCAACTACAAGTTAAGCGTTTAGAACAACGCCTAGCGGATCGCAAGATGTCTCTG
AAGTTGTCGGAAAGTGCTCTCGACTTCTTGGCAGAAGTGGGTTATGACCCCGTTTTCGGTGCTCGTCCTCTGAAACGAGC
GATTCAGCGGGAATTAGAAACGCAAATTGCTAAGGCGATTTTGCGAGGTGAGTTTAATGATGGGGACACCATCTTTGTGG
ATGTGGAAAATGAACGGTTAGCGTTTAAGCGCTTGCCTGCTGAGTTGTTAACAGCTCAATCCACCTAA

Protein sequence :
MQPTNPNQFTEKAWEAIARTPDIAKAAQQQQLESEHLLKALLEQDGLANSIFNKLEVPVQRVREATESFSQRQPKVSGSS
GSVYLGRSLDALLDRAESYRKDYKDEFISIEHLILAYLKDDRFGKSLFQEFKLDEKKLKNAIDQIRGNQKVTDQNPEGKY
EALEKYGRDLTQAAREGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPESLKDRKLI
ALDMGALIAGAKFRGEFEERLKAVLKEVTDSRGQLILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDE
YRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERYELHHGVKISDSSLVAAATLSTRYISDRFLPDKAIDLVDEAA
ARLKMEITSKPEELDEINRKILQLEMERLSLQKESDRASVERLERLEKELANLKEEQRTLNAQWQSEKDVLNHIQSIKEE
IDRVNVEISQAERDYDLNKAAELKYGKLSQLQKSLQEAETQLAATQTSGKSLLREEVTESDIAEIISKWTGIPISKLVES
EKEKLLHLEDELHQRVVGQDEAVTAVADAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALASYLFDTEDALVRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTESIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDAQGHTVDFKNTVI
IMTSNVGSQYILDLATEDSQYDEMRSRVMEAMRSSFRPEFLNRIDEIIIFHSLQKHQLRHIVQLQVKRLEQRLADRKMSL
KLSESALDFLAEVGYDPVFGARPLKRAIQRELETQIAKAILRGEFNDGDTIFVDVENERLAFKRLPAELLTAQST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-107 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 6e-106 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 4e-106 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mic7113_2182 YP_007121403.1 ATP-dependent chaperone ClpB VFG2084 Protein 2e-110 44
Mic7113_2182 YP_007121403.1 ATP-dependent chaperone ClpB VFG2076 Protein 8e-117 42