Gene Information

Name : Mic7113_1512 (Mic7113_1512)
Accession : YP_007120794.1
Strain : Microcoleus sp. PCC 7113
Genome accession: NC_019738
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1759392 - 1761875 bp
Length : 2484 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA)

DNA sequence :
ATGTTTGAACGCTTCACAGATACAGCAATTAAGGTGATTCGGCTAGCCCAAGAAGAAGCACGTCGCCTAGGTCACAATTT
TGTAGGTACAGAGCAGATTTTGTTAGGTCTGATTGGAGAAGCCGATGGTATCGCCGCAACCGTCTTGCAATCTTTGGGCA
TCACGATTCAAGAAGTCAGAGAAGAAATTGAAAAAATTATTGGTCGGGGTTCGGGCTTTGTCGCGGTTGAAATTCCCTTC
ACTCCCAGGAGTAAGCGTGTCCTTGAACTATCCCTCGAAGAATCTCGCACCCTAGGGCAGGACTACGTTGGCACCGAACA
CTTACTTTTGGGTTTAATCCGAGATGGAGAAGGTGTGGCGGCAAGAGTACTCTTAAACCTAGGAGTTGACTCCAAAGAAG
TTCGGGCTAAAGTCATCGAAATGCTTTCCGAAGCGAAACCGACCCTCAATGCGCCCAGTCGCACCCGTACCAAGACGCCA
ACCCTCGACGAATGTGGCACCAACTTGACTCAGCTCGCCGCACAGGGCAAGCTCGATCCCGTCGTGGGACGCCGGAAAGA
AGTGGAACGAATGATTCAAATTCTGGTTCGTCGCACCAAGAACAATCCAATCTTAATCGGAGAGCCAGGAGTTGGGAAAA
CGGCACTAGCAGAGGGACTCGCTCAGCGCATTATCAACAACGATGTTCCCATCAGCCTTCAAGGCAAGCAGGTTCTTACC
CTGGATACAGGTTCACTACTTGCCGGCACTAAGTACCGAGGTGAGTTTGAAGAGCGCCTCAAGAAAATCATTGAGGAAAT
TCGGTCGTGCCAAAATATCATCTTGATGGTAGATGAGGTTCATACTTTAGTTGGGGCTGGAGCCGTGTCAGGTTCCCTCG
ATGCAGCCAATATCCTTAAACCTGCCTTAGCGCGGGGCGAAATCCAGTGTATTGGTGCCACCACCTTGGATGAATACCGT
AAGTACATTGAGCGGGATGCGGCATTAGAACGTCGTTTTCAACCCGTGATGGTAGATGAACCCAGCGTAGAAGAAACCAT
TGAAATTTTATATGGTTTGCGCGATCGCTACGAACAGCACCACCAGATTAAAATCTCAGACTTGGCTCTCGAAGCTGCCG
CTAAACTCTCCGACCGATATATCTCAGACCGTTTTCTACCCGACAAAGCCATTGACTTAATTGATGAAGCCGGAAGCCGC
GTCCGGATACTCAACTCAAAAGTACCATCCAGTGCCAAAAGTCTTAAAAAAGAACTGCGCCAAGTGCTTAAAGATAAAGG
AGACGCGATTGGCTTGCAAGAGTTTAGTAAAGCCGGACAAATGCGTGCTCAAGAGATAAGAATTCAGGCAGAGATTCGGG
CGCTCATCCAGAATGAACCCTCTAACGTGAGTGATGCTGATGAGGTTGACTACGCTCCCATCGTCAATCAAGAGGACATT
GCCCACATTGTTGCTTCTTGGACAGGAATTCCGGTGAACAAATTAACCGAATCCGAGTCTTCTAAGCTGCTTCAAATGGA
AGATATTTTACATCAGCGACTCGTCGGTCAAGAAGAAGCCGTCAAGGCGATTTCTCGTGCCATTCGTCGCGCCCGTGTGG
GTATTAGTAACCCCAATCGACCCATTGCCAGTTTTATCTTTTCGGGTCCGACGGGAGTGGGGAAGACGGAACTCGCCAAG
TCATTGGCAGCTTACTTTTTTGGCTCTGAATCGGCGATGATTCGGTTGGATATGTCCGAATACATGGAGCGTCACACCGT
CTCCAAACTCATCGGTTCCCCTCCTGGATATGTGGGTTTTAACGAAGGGGGGCAACTCACTGAAGCCGTTCGCCGTCGTC
CTTATACCGTTGTACTCTTTGACGAAATTGAAAAAGCCCACCCTGATGTGTTCAACCTGCTGCTACAAATTTTGGAAGAT
GGTCGTTTGAGTGATACTAAGGGTCGGACGGTGGACTTTAGAAATACGTTGTTGATTATGACCTCCAACATCGGTTCTAA
AGTAATTGAAAAAGGTGGCGGTGGTCTCGGTTTTGATTGGAGTGAAAATCAAGCTGATGCTCAATACAGAGGCATTAGTT
CTCTGGTGAATGAAGAACTAAAAGCTTATTTCCGTCCAGAGTTCCTCAATCGTTTGGATGAAATCATTGTCTTCCGGCAA
CTCAGTAAGAATGAAGTTAAACAAATTGCCTCTATCCTTTTAAACGAAGTGTTCAGTCGGTTAAAGGAACAAGGCATTAC
ATTGGAGGTTACTGAACGGTTTAAGGACCGCTTGGTAGAAGAAGGTTATGACCCCAGTTATGGCGCACGTCCTTTGCGTC
GGGCAATCACTCGGTTGTTGGAAGATTGCCTCGCGGAGGAAATTTTAAGCGGTCGCCTTCAAGAGGCAGATACGGTTGTT
GTGGATATCGATGATCAGGGGCAAATTAAAGTGTTGCAGGGCGATAAACAGGAGCTATTGCCTCCAACAGCTTTAGCGGG
ATAG

Protein sequence :
MFERFTDTAIKVIRLAQEEARRLGHNFVGTEQILLGLIGEADGIAATVLQSLGITIQEVREEIEKIIGRGSGFVAVEIPF
TPRSKRVLELSLEESRTLGQDYVGTEHLLLGLIRDGEGVAARVLLNLGVDSKEVRAKVIEMLSEAKPTLNAPSRTRTKTP
TLDECGTNLTQLAAQGKLDPVVGRRKEVERMIQILVRRTKNNPILIGEPGVGKTALAEGLAQRIINNDVPISLQGKQVLT
LDTGSLLAGTKYRGEFEERLKKIIEEIRSCQNIILMVDEVHTLVGAGAVSGSLDAANILKPALARGEIQCIGATTLDEYR
KYIERDAALERRFQPVMVDEPSVEETIEILYGLRDRYEQHHQIKISDLALEAAAKLSDRYISDRFLPDKAIDLIDEAGSR
VRILNSKVPSSAKSLKKELRQVLKDKGDAIGLQEFSKAGQMRAQEIRIQAEIRALIQNEPSNVSDADEVDYAPIVNQEDI
AHIVASWTGIPVNKLTESESSKLLQMEDILHQRLVGQEEAVKAISRAIRRARVGISNPNRPIASFIFSGPTGVGKTELAK
SLAAYFFGSESAMIRLDMSEYMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILED
GRLSDTKGRTVDFRNTLLIMTSNIGSKVIEKGGGGLGFDWSENQADAQYRGISSLVNEELKAYFRPEFLNRLDEIIVFRQ
LSKNEVKQIASILLNEVFSRLKEQGITLEVTERFKDRLVEEGYDPSYGARPLRRAITRLLEDCLAEEILSGRLQEADTVV
VDIDDQGQIKVLQGDKQELLPPTALAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mic7113_1512 YP_007120794.1 chaperone ATPase VFG0079 Protein 0.0 57
Mic7113_1512 YP_007120794.1 chaperone ATPase VFG0080 Protein 1e-149 51