Gene Information

Name : Osc7112_6246 (Osc7112_6246)
Accession : YP_007118838.1
Strain : Oscillatoria nigro-viridis PCC 7112
Genome accession: NC_019729
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : 2.2.1.3
Position : 7468915 - 7470930 bp
Length : 2016 bp
Strand : -
Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast; COGs: COG0021 Transketolase; InterPro IPR005478:IPR005475:IPR005474:IPR00547

DNA sequence :
ATGGCTGTTGCAACCCAATCACTCGAAGAACTCTGCATCAACTCTATTCGCTTTTTGGCCATCGATGCGGTAGAAAAAGC
AAAATCAGGACACCCGGGACTGCCGATGGGCGCTGCCCCTATGGCCTTTGTGCTGTGGGATCGGTTCATGCGGTTCAACC
CCAAAAACCCCAAGTGGTTTAACCGCGATCGCTTCGTCCTCTCCGCCGGCCACGGCTGTATGCTACAGTACGCCCTCCTG
TACTTGACCGGCTACGATAGCGTCACCCTCGACGACATCAAGCAATTTCGCCAGTGGGAATCCAAAACCCCCGGACACCC
CGAAAACTTCGTCACCGAAGGCGTAGAAGTTACCACAGGCCCCCTGGGACAAGGAATTGCTAATGCCGTCGGTTTGGCAA
TGGCAGAAGCTCACCTCGCTGCTAAGTTTAACAAACCCGACCACACAATTGTTGACCACTACACCTATGTAATTTTGGGT
GACGGCTGCCAAATGGAAGGTGTTTCTGGCGAAGCTTGTTCTTTGGCCGGACACCTGGGACTGGGCAAATTAATTGCCTT
GTACGATGACAATCACATTTCCATTGAAGGTAATACTAATTTAGCCTTTACTGAAGATGTGGGCAAGCGTTTTGAAGCCT
ACGGCTGGCACGTTGTTACTGTAGATAATACCAATCTTGACGAAGATACTAGCTTAGAAGCAGTTCACAAAGCTATTGAA
GAATCCAAGAAAGTGACGGACAAACCGTCGATGATTAAAATCCGCACGATCATCGGTTACGGTTCTCCGAATAAACGGGA
TTCTTACAGCGCTCACGGTGCTGCTTTGGGTAGCGATGAAGTGCAAGCAACTCGCGATTTCTTGAATTGGGAACACCCAC
CGTTTGTGGTTCCCGATGATGCTTTGGCTCACTTCCGCAAAGCAGTCGATCGCGGCGCTCAAGCTGAACAAGAATGGCAG
ACAGCTTTTGATGCTTATAAAGCAGCATATCCTGCAGAAGCAGCAGAATACGAGCGCACGGTGGCCGGCAAACTTCCTGA
AGGTTGGGATAAAGTTTTGCCGACATACAAGCCGGAAGATAAAGCAGATTCCACTCGGAATCATTCTGGAAAGTGTTTGA
ATGCTTTGGCAGGTGTGCTACCTGAATTGATCGGCGGTTCCGCTGACTTGGCATCTTCTAACATGACTTTGCTCAAGGGT
GAAAAAGACTTCCAAAAAGGTCAGTACGAAGGACGCAACCTGCGGTTTGGCGTGCGGGAGCACGGCATGGGCGCGATCGC
CAACGGCTTGCTCCTCCACGGCGGTTTAATTCCTTACTGCGCTACTTTCTTGGTATTTGCTGACTATATGCGGGGCGCAA
TTCGCCTCTCTGCACTCTCGGAAGCTGGAGTTATTTATGTAATGACTCACGACTCCGTAGCCTTGGGCGAAGACGGCCCC
ACTCACCAACCCGTGGAAACTATCGCTTCTTTGCGCGTAATTCCCGATTTGTTGGTAATGCGCCCTGCTGATGGTAATGA
AACATCCGGCGCTTACAAAGTGGCAGTTGAAAGCCGCACTCGCCCAACTTTAATGGCTTTGTCGCGCCAAAATCTGCCCA
ATTTGGCTGGAAGTTCGATCGAAGGAACGGCCAAAGGCGCTTACATTTTGTCCGACGACGGCGGCACTCCCGACATCATT
TTAATCGGCACCGGCGGCGAAACCTACCTCTGCGTTGATGCCGCTGAAAAATTGCGCGCTGCAGGTAATAAAGTGCGCGT
AGTTTCGATGCCTTGCTGGGAATTGTTCGACTTACAAGATGCCGCTTACCGCGAATCGGTACTGCCGAAAGCTGTTACTA
AGCGGTTGGCCGTTGAAGCAGCTTGTAGCTTCGGCTGGGGACGTTATTTGGGTTCCGAAGGCGATAGCATCAGCATCGAC
AGATTCGGCGCTTCTGCACCGGGCCCCGTTGCTTTAGAAAAGTTTGGCTACACCGTTGATAATGTGGTAGCTAAGGCTCA
GGCGCTGTTGGGTTAA

Protein sequence :
MAVATQSLEELCINSIRFLAIDAVEKAKSGHPGLPMGAAPMAFVLWDRFMRFNPKNPKWFNRDRFVLSAGHGCMLQYALL
YLTGYDSVTLDDIKQFRQWESKTPGHPENFVTEGVEVTTGPLGQGIANAVGLAMAEAHLAAKFNKPDHTIVDHYTYVILG
DGCQMEGVSGEACSLAGHLGLGKLIALYDDNHISIEGNTNLAFTEDVGKRFEAYGWHVVTVDNTNLDEDTSLEAVHKAIE
ESKKVTDKPSMIKIRTIIGYGSPNKRDSYSAHGAALGSDEVQATRDFLNWEHPPFVVPDDALAHFRKAVDRGAQAEQEWQ
TAFDAYKAAYPAEAAEYERTVAGKLPEGWDKVLPTYKPEDKADSTRNHSGKCLNALAGVLPELIGGSADLASSNMTLLKG
EKDFQKGQYEGRNLRFGVREHGMGAIANGLLLHGGLIPYCATFLVFADYMRGAIRLSALSEAGVIYVMTHDSVALGEDGP
THQPVETIASLRVIPDLLVMRPADGNETSGAYKVAVESRTRPTLMALSRQNLPNLAGSSIEGTAKGAYILSDDGGTPDII
LIGTGGETYLCVDAAEKLRAAGNKVRVVSMPCWELFDLQDAAYRESVLPKAVTKRLAVEAACSFGWGRYLGSEGDSISID
RFGASAPGPVALEKFGYTVDNVVAKAQALLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-150 52
tktA AAO17218.1 TktA Not tested tcd island Protein 2e-149 52