Gene Information

Name : Osc7112_5534 (Osc7112_5534)
Accession : YP_007118177.1
Strain : Oscillatoria nigro-viridis PCC 7112
Genome accession: NC_019729
Putative virulence/resistance : Resistance
Product : Beta-lactamase
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.2.6
Position : 6606400 - 6607272 bp
Length : 873 bp
Strand : -
Note : PFAM: Penicillin binding protein transpeptidase domain; COGs: COG2602 Beta-lactamase class D; InterPro IPR001460; KEGG: amr:AM1_4306 beta-lactamase, putative; PFAM: Penicillin-binding protein, transpeptidase; PRIAM: Beta-lactamase; SPTR: Putative Beta-lac

DNA sequence :
ATGAACCGAATATCTCGTGCGATCGCTGTTGTTTTAATTGTATTAGGCTGCATTACTTTTGTTTTACTTCAGCCACCGCA
ATCAGCCTTAACCGTGCCACCTCCTGTGCAAGAATCTCCACGACGCGGAGGAGATGTTGCTCAGACAATGAATTTTGGAC
GGCACTTTCAAGAACTAGGAGTTGAAGGCTCGATCGCAATTTACGATTTGAACAGCGATCGGCTTTATCAACACAACCCG
CAGCGTAACGCCACAGCTTTTTTACCAGCATCTACATTTAAGATTCTCAACTCTCTGATTTCATTAGAAACAGGGGTGAT
TTCAGATGAGATTGCCGTGCTAACTTGGGATGGAATTCAAAGGCAAATTCCCGCATGGAATCGAGACTTGAATATGAGAG
AAGCCATCAAACTTTCCGCCGTTTGGTTTTACCAAGTTCTCGCCCGCCGAGTCGGGCACGAGCAAATGCAAAAATGGGTA
ACTAAAGTCGGTTACGGCAACCAAAAAATCGGTAACAAAGACGATATTGACAAATTCTGGTTAGAGGGAGAACTGCGAAT
CACACCCAACGAGCAAATTCAATTTCTCCGCCGTCTGTACAAAAATGACTTACCCTTTTCTGAGCGATCGCTGTCTCTGG
TGAAAGACATCATAATTGTCGAACAAACTCCCGATTACACAATTAGGGCAAAAACAGGCTGGGCAAGCTTTGGAGAACAA
ACAAAGCCTCAAATTGGCTGGTATGTAGGTTATTTAGAAAAGGATAAAAATGTTTACTTTTTTGCTACAAACATTGACAT
CCGCAACAATAATGACGCCCCTGCAAGAATCGAGTTAACCCGCCGTTGCTTCAAGGATATGGCGCTGCTGTAA

Protein sequence :
MNRISRAIAVVLIVLGCITFVLLQPPQSALTVPPPVQESPRRGGDVAQTMNFGRHFQELGVEGSIAIYDLNSDRLYQHNP
QRNATAFLPASTFKILNSLISLETGVISDEIAVLTWDGIQRQIPAWNRDLNMREAIKLSAVWFYQVLARRVGHEQMQKWV
TKVGYGNQKIGNKDDIDKFWLEGELRITPNEQIQFLRRLYKNDLPFSERSLSLVKDIIIVEQTPDYTIRAKTGWASFGEQ
TKPQIGWYVGYLEKDKNVYFFATNIDIRNNNDAPARIELTRRCFKDMALL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bla OXA-10 CAJ77047.1 Oxacillinase Not tested AbaR1 Protein 4e-44 41
blaOXA-129 AET25386.1 OXA-129 beta-lactamase Not tested PAGI-2(C) Protein 1e-44 41
bla OXA-129 AFG30109.1 OXA-129 beta-lactamase Not tested PAGI-2 Protein 1e-44 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Osc7112_5534 YP_007118177.1 Beta-lactamase AY343493.1.gene1.p01 Protein 4e-42 44
Osc7112_5534 YP_007118177.1 Beta-lactamase HQ700343.1.gene1.p01 Protein 8e-40 43
Osc7112_5534 YP_007118177.1 Beta-lactamase JN205800.1.gene6.p01 Protein 4e-42 43
Osc7112_5534 YP_007118177.1 Beta-lactamase HM015773.1.gene6.p01 Protein 2e-42 43
Osc7112_5534 YP_007118177.1 Beta-lactamase JF273470.1.gene1.p01 Protein 2e-38 43
Osc7112_5534 YP_007118177.1 Beta-lactamase EU086834.1.gene1.p01 Protein 8e-38 43
Osc7112_5534 YP_007118177.1 Beta-lactamase AY500137.1.gene1.p01 Protein 1e-43 42
Osc7112_5534 YP_007118177.1 Beta-lactamase X58272.1.gene1.p01 Protein 8e-45 42
Osc7112_5534 YP_007118177.1 Beta-lactamase EU086830.1.gene1.p01 Protein 1e-37 42
Osc7112_5534 YP_007118177.1 Beta-lactamase AM412777.1.gene1.p01 Protein 6e-43 41
Osc7112_5534 YP_007118177.1 Beta-lactamase U37105.2.gene2.p01 Protein 2e-44 41
Osc7112_5534 YP_007118177.1 Beta-lactamase NC_010410.6002874.p0 Protein 2e-44 41
Osc7112_5534 YP_007118177.1 Beta-lactamase AM932669.1.gene2.p01 Protein 8e-45 41