Gene Information

Name : Osc7112_5312 (Osc7112_5312)
Accession : YP_007117966.1
Strain : Oscillatoria nigro-viridis PCC 7112
Genome accession: NC_019729
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 6346439 - 6347860 bp
Length : 1422 bp
Strand : -
Note : PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; COGs: COG0174 Glutamine synthetase; InterPro IPR004809:IPR008147:IPR008146; KEGG: cyj:Cyan7822_3398 glutamine synthetase; PFAM: G

DNA sequence :
ATGTTCCAGACGCCGCAAGAAGCCTTAAACTACATAAAAGAAAATCAAATCCAGATCGTTGACCTCAAGTTCATCGATAT
GCCGGGGATCTGGCAACACCTTTCCCTGTACCACGACCAAATCGACGAAAGCGCATTCACAGACGGCGTACCCTTTGACG
GTTCCAGCATCCGGGGCTGGAAAGCCATCAACGAATCAGACATGACGATGGTCATCGATCCGACCACCGCTTGGATGGAC
CCGTTCATGGCAGAACCGACCATCAGCTTCATTTGCAGCATCAAAGAACCCCGCACCGGCGAACCGTACAGTCGCTGTCC
CCGCACCATTGCCCAAAAAGCCATAGACTACTTGCTTTCCACCGGTCTCGGCGATACAGCATTCTTTGGCCCGGAAGCAG
AATTCTTTATTTTTGACGACGTTCGCTTCGACCAAACCCAAAATTCCGGCTACTATTACGTAGATTCGATCGAAGGTCGC
TGGAATTCCGGCAAAGAAGAAGCAGGCGGCAACCTCGGCTACAAACCGCGTTACAAAGAAGGTTATTTCCCAGTAGCACC
AACCGATACCTCACAAGACATGAGAACGGAAATGCTGCTGACAATGGCAAAATGCGGCGTACCCATCGAAAAGCACCACC
ACGAAGTCGCCACCGGCGGTCAATGCGAACTAGGTTTCCGCTTTGCAACTTTAGTACAAGCCGCCGACTACTTGCTGACT
TACAAATACGTCATCAAAAACGTCGGCAAAAAATACGGCAAAACCATCACCTTCATGCCCAAACCGCTGTTTAACGACAA
CGGTTCCGGGATGCACGTTCACCAGTCGATTTGGAAAGACGGTCAGCCTCTATTTGCAGGCGATAAATATGCTGGTTTCA
GTCAAATGGGACTGCATTACATCGGCGGCATTCTCAAGCACGCACCGGCACTTTTGGCAATCACCAACCCCACGACCAAT
TCCTACAAGCGTTTAGTTCCGGGCTTTGAAGCTCCTGTAAACTTAGCTTACTCTCAAGGAAACCGATCGGCATCAGTGCG
GATTCCGTTGTCGGGAACCAACCCCAAAGCCAAGCGGTTAGAATTCCGCTGTCCCGATGCCACATCTAACCCCTATTTAG
CATTTGCAGCCATGCTGTGCGCCGGCATAGACGGCATCAAGAATCAAATCGATCCGGGCGAACCTTTGGACGTGGATATC
TACGACCTTTCCCCTGAAGAATTGAGCAAAATTCCTTCCACTCCCGGTTCCTTGGAAGGCGCTTTAGAAGCTTTAGAAAA
AGACCACAGTTTCTTAACTGATAGCGGCGTATTTACCGAAGACTTCATCCAAACCTGGATTTCCTACAAACTCGACAATG
AAGTCAACCCGATGCGGCTGCGTCCTCACCCCTACGAGTTTTCTCTCTACTACGACTGTTAG

Protein sequence :
MFQTPQEALNYIKENQIQIVDLKFIDMPGIWQHLSLYHDQIDESAFTDGVPFDGSSIRGWKAINESDMTMVIDPTTAWMD
PFMAEPTISFICSIKEPRTGEPYSRCPRTIAQKAIDYLLSTGLGDTAFFGPEAEFFIFDDVRFDQTQNSGYYYVDSIEGR
WNSGKEEAGGNLGYKPRYKEGYFPVAPTDTSQDMRTEMLLTMAKCGVPIEKHHHEVATGGQCELGFRFATLVQAADYLLT
YKYVIKNVGKKYGKTITFMPKPLFNDNGSGMHVHQSIWKDGQPLFAGDKYAGFSQMGLHYIGGILKHAPALLAITNPTTN
SYKRLVPGFEAPVNLAYSQGNRSASVRIPLSGTNPKAKRLEFRCPDATSNPYLAFAAMLCAGIDGIKNQIDPGEPLDVDI
YDLSPEELSKIPSTPGSLEGALEALEKDHSFLTDSGVFTEDFIQTWISYKLDNEVNPMRLRPHPYEFSLYYDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 6e-105 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Osc7112_5312 YP_007117966.1 glutamine synthetase, type I VFG1399 Protein 4e-132 57