|
Name : Osc7112_5304 (Osc7112_5304) Accession : YP_007117958.1 Strain : Oscillatoria nigro-viridis PCC 7112 Genome accession: NC_019729 Putative virulence/resistance : Unknown Product : transcriptional regulator, LysR family Function : - COG functional category : - COG ID : - EC number : - Position : 6340854 - 6341741 bp Length : 888 bp Strand : + Note : PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: npu:Npun_F4963 LysR family transcriptional regulator; PFAM: LysR, substrate-bindi DNA sequence : ATGGAACTTCGGCATTTGCGTTATTTCATTGCAGTAGCAGAGGAACTGAATTTCACTCGTGCAGCAGAAAAACTGCATAT TGCCCAACCTCCGCTGAGCCAACAAATCCAGCATTTAGAGGCAGAGTTGGGATTTCAACTGTTTCGCCGCACCAAGCGGA CGGTACATTTAACGGCAGCGGGACAGGTTTTTTTCGAGGAGGCCGGGAAAATTCTGCTGCAAGTCGATCGAGCAATTCAA CTCGGCCGACAAACCAGTCGGGGCGAACTCGGACAATTGACGATCGGCTTTGTGAGTTCCGCAGCACACAACGTGGTTCC GGCGATTTTGCAGGCGTTTCGCACTCGGTGTCCCGCCGTCAAACTGGAACTGCACGAACTGACCACAAACGAACAGTTGC AGCGGCTGCGGTTCGGGCAAATTGATATCGGCTTCGTGCGCCCTCCGGTTGAGGAAGAGGGGATAAATTCTGAAATCGTT TTTCGAGAATCCCTGATCGTGGCACTGCCAGAAACGCATCCGGCGGCCGATCGCGCGAAGGTAGAATTGCGCGAACTCTC TACCGAACCGTTCATTTTATTTCCGCGCTCCCAGGCTCCGGGATTGTACGATGCGATCGTCAGTCTTTGTCAGCAAGCAG GTTTTAGCCCTCGCGCGGCTCAAGAAGCAATTCAAATGCAAACTATTGTGAGTCTGGTAGCGGCCGAGATGGGAGTGGCG ATCGTCCCGGCGTCGATGCAAAATTTCCAGCGCAGCGGGGTTGTTTACAAAGCGCTGCCAGAATCAACCTGCATTGTGGC GATCGCTCTGATTTGGCGCAGCGATCCAACGGAGGCGGTGCAGCGGTTTTTGGAAGTCACCAGACAGATCGGCGGATTTG ATATTTGA Protein sequence : MELRHLRYFIAVAEELNFTRAAEKLHIAQPPLSQQIQHLEAELGFQLFRRTKRTVHLTAAGQVFFEEAGKILLQVDRAIQ LGRQTSRGELGQLTIGFVSSAAHNVVPAILQAFRTRCPAVKLELHELTTNEQLQRLRFGQIDIGFVRPPVEEEGINSEIV FRESLIVALPETHPAADRAKVELRELSTEPFILFPRSQAPGLYDAIVSLCQQAGFSPRAAQEAIQMQTIVSLVAAEMGVA IVPASMQNFQRSGVVYKALPESTCIVAIALIWRSDPTEAVQRFLEVTRQIGGFDI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| stmR | AAK97547.1 | StmR | Not tested | SPI-6 | Protein | 4e-54 | 42 |
