Gene Information

Name : Osc7112_4184 (Osc7112_4184)
Accession : YP_007116923.1
Strain : Oscillatoria nigro-viridis PCC 7112
Genome accession: NC_019729
Putative virulence/resistance : Virulence
Product : transport system permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4954456 - 4955454 bp
Length : 999 bp
Strand : -
Note : PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: npu:Npun_F1625 transport system permease protein; PFAM: ABC transporter permease protein; SPTR: Transport system permease

DNA sequence : 
GTGAATCTCCCAAAAATCTGGCTAAAATATCGAGTTTTTCAGGCAGTTATATTCTTAGGATTGGGTTTGCTATTAACCAT
CGCCCTTTCACTTTCTTTTGGTGCGGTGCCGATGAGTGCCGATCAATTGTGGCAAGCATTTCTGCACCGAGGTGATGCTG
TCAATCAGACTATTTTCTGGGAATTGCGTTTGCCCAGAGTTGCGGCAGCGCTGACGGTTGGTGCGGCTTTGGGAATGTCG
GGGGCTTTGCTGCAAGGTTTGCTCCGCAACGGTTTAGCCGATCCTTTTGTATTAGGAATTTCGGCGGGTGCGGGGTTGGT
TGCGATTACAATGCTGACTTTGGGAATATTTCAAACTTGGGTGCCTTTGGCGGCTTGGATAGGTGCTATTTTAACTTCGA
TGCTGGTCTACTTTTTGGGAAAAACTAAAACGGGAATTTCCGTGGAACGTTTGGTTTTAGCTGGTGTGGCTGTGAGTTCT
CTGTTTGGGGCAATACAAACTACACTGCTGCTGTTAGCTGAAGACAGCCGCTTGCAAGCGGCTTTGAATTGGTTGATCGG
CAGTTTGAACGGTCGCGGTTGGTCGGATTTGCAGGTGGCTGCACCTTATATTTTGGCTGCTTTGCTGTTAGGATGTTTTT
TGGGTCGATCGATAAATTTGCTGGCTTTGGGTGACGATTTAGCTGTTGGTTTGGGGGTTTCGCTGGTACGATCGCGCTTA
TTGATTGGTGGTGTTGCTACTTTGCTAGCTGCGAGTGCTGTCAGCATCGGCGGATTGATTGGTTTTGTGGGATTGGTTGT
GCCTCACGGGGTGCGTTTGTTGGTTGGTAACGATTATCGGTTTGTATTGCCGCTGAGTGCGATCGGCGGTGCTTGGGTGT
TGACTTTTGCTGATTTTTTGGCTCGTTTGGGTGCCGTAGAATTGCCTGTGGGTACGGTTACGGCTTTGTTGGGTTCTCCC
CTGTTTGTCTGGCTGCTTTATCGGCGTTCTAGTTATTAG

Protein sequence : 
MNLPKIWLKYRVFQAVIFLGLGLLLTIALSLSFGAVPMSADQLWQAFLHRGDAVNQTIFWELRLPRVAAALTVGAALGMS
GALLQGLLRNGLADPFVLGISAGAGLVAITMLTLGIFQTWVPLAAWIGAILTSMLVYFLGKTKTGISVERLVLAGVAVSS
LFGAIQTTLLLLAEDSRLQAALNWLIGSLNGRGWSDLQVAAPYILAALLLGCFLGRSINLLALGDDLAVGLGVSLVRSRL
LIGGVATLLAASAVSIGGLIGFVGLVVPHGVRLLVGNDYRFVLPLSAIGGAWVLTFADFLARLGAVELPVGTVTALLGSP
LFVWLLYRRSSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 2e-11 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Osc7112_4184 YP_007116923.1 transport system permease protein BAC0163 Protein 1e-11 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Osc7112_4184 YP_007116923.1 transport system permease protein VFG1043 Protein 1e-11 42