Gene Information

Name : Osc7112_3868 (Osc7112_3868)
Accession : YP_007116625.1
Strain : Oscillatoria nigro-viridis PCC 7112
Genome accession: NC_019729
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4574369 - 4576984 bp
Length : 2616 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activi

DNA sequence :
ATGCAACCGAATAATCCGAACCAATTTACTGAAAAAGCTTGGGAAGCCCTCGCCCGCACCCCCGAAATCGTCAAAGCAGG
TCAGCAGCAGCAGCTAGAAAGCGAACATTTGATGAAAGCTTTGCTGGAACAAGAATCTGGACTTGCTAGCAGCTTATTTA
ACAAAGCAGGCGTGTCTGTACCAAAATTGCGCGATCGCACTGATGAGTTTATCAGTCGCCAGCCGAAAATTACTGGAAGC
GGCGGCAACGTTTATCTCGGTCGTTCTCTCGACACCCTGCTAGACCGCGCCGAAACTTATCGCAAAGACTACGGCGATGA
ATTTATTTCGATCGAGCATTTGATACTAGGTTACGTTAAGGACGATCGTTTTGGCAAAAATCTACTACAAGAATTTAAAC
TAGATGAAGCCAAGCTCAAAGATATCATTACCCAAGTCCGGGGGAAGAACAAAGTGACCGATCAAAATCCAGAAGGCAAA
TACGAAGCGCTGGAAAAATACGGCCGAGATTTGACAGAAGCCGCGCGTCAAGGCAAACTCGATCCGGTAATCGGACGGGA
TGACGAAATCCGCCGCACGATTCAAATTTTGAGCCGCCGCACCAAAAACAACCCCGTACTGATTGGGGAACCGGGAGTAG
GAAAAACTGCGATCGCCGAAGGACTCGCCCAGCGAATTATCACCGGAGATGTGCCGCAATCTCTCAAAGACCGACAATTA
ATTAGCTTAGATATGGGCGCGTTAATTGCCGGTGCAAAATTCCGGGGAGAATTTGAAGAACGCTTGAAAGCAGTGCTCAA
AGAAGTTACCGACAGCAACGGCAAAGTCATCTTATTTATCGATGAAATTCACACCGTTGTCGGTGCCGGTGCCACTCAAG
GCTCGATGGATGCCGGCAACTTGCTCAAACCCATGTTAGCGAGGGGAGAATTGCGCTGTATCGGCGCTACAACTCTCGAC
GAATACCGCAAGTACCTCGAAAAAGATGCGGCACTAGAACGCCGTTTTCAACAAGTTTATGTTGACCAACCGACAGTTGA
AGATACTGTCTCGATTTTGCGGGGCTTGAAAGAACGGTACGAAGTTCACCACGGGGTAAAAATTTCCGACAGCGCCCTAG
TGGCGGCGGCTACTTTGTCTACTCGATATATTAGCGATCGCTTCCTTCCAGACAAAGCCATTGACTTAGTGGACGAAGCA
GCGGCTAAACTCAAAATGGAGATTACCTCCAAGCCGGAAGAACTAGACGAAATCGACCGCAGGATTTTGCAGCTAGAAAT
GGAAAGACTGTCGCTGCAAAAAGAAAGTAACGTTGCTTCGATCGAACGTTTGGAAAGACTGGAAAAAGACTTAGCCAATC
TTAAGGAACAGCAAAGCGCTTTGAATGCTCAGTGGCAATCGGAAAAAGGTGTCATCGGCAGCATTCAAAAGATTAAAGAA
CAGATTGATAAGGTCAATATTGAAATTCAACAAGCTGAATTAAAATATGACCTGAACCGCGCTGCTGAGTTGAAATATAG
CAAGTTAACCGAATTGCAAAAACAACTGCAACAAGCTGAATCTCAACTGTCAGCAACTCAAACCACAGGTAAAACTTTGC
TGCGGGAAGAAGTTACAGAAGGTGACATTGCCGAGATTATTTCCAAGTGGACGGGAATTCCGATCAGCAAGTTGGTTGAA
TCGGAAATGCAGAAACTTCTGCACTTGGAAGATGAACTGCACAAGCGGGTAATTGGACAGGATGAAGCGGTGACGGCGGT
TGCAGATGCAATTCAGCGATCGCGCGCGGGTTTAGCCGATCCAAATCGTCCGGTGGCGAGTTTTATCTTCCTCGGCCCCA
CGGGTGTTGGTAAAACTGAGTTGGCGAAAGCATTAGCGGCTTATCTGTTCGACACCGAAGAAGCGATCGTCCGAATTGAT
ATGTCGGAATACATGGAGAAACACGCGGTTTCGCGGTTAATTGGTGCGCCTCCGGGATACGTCGGCTACGATGAAGGCGG
ACAATTAACTGAGGCCGTGCGCCGCCGTCCTTACTCAGTGATTCTATTTGATGAAATCGAGAAAGCGCACCCGGATGTAT
TCAATATCATGCTGCAAATTTTGGATGACGGCCGCGTTACCGATGCTCAAGGTCACACAGTAGACTTTAAGAATTCTGTG
ATTATTATGACATCGAATGTCGGCTCTCAATACATCTTAGATGTGGCGGGAGATAACGAACTAATGCGGAGTCGGGTGAT
GGAAGCGATGCGGGGAACTTTCCGCCCGGAATTCCTGAACCGGATTGATGAAATGATTATCTTCCACGGTTTGAGTAAGA
CGGAACTGCGGCAGATTGTGCTGTTGCAAGTTAAGCGCTTGGAAAAACGGTTAGCCGATCGCAAAATGTCTCTGAAATTG
TCGGAATCTGCGATCGACTTTTTAGCAGAAATTGGTTACGATCCGGTTTACGGTGCGCGGCCTTTGAAGCGGGGAATTCA
ACGCGAGTTGGAAACGCAAATGGCGAAGGGTATTTTGCGGGGAGATTTTGCTGACGGCGATACCATTTTTGTGGATATCG
AGAATGAAAGGTTGGCGTTTAAGCGGCTGCCGGCGGGGTTGGTGACTGCGAAATAG

Protein sequence :
MQPNNPNQFTEKAWEALARTPEIVKAGQQQQLESEHLMKALLEQESGLASSLFNKAGVSVPKLRDRTDEFISRQPKITGS
GGNVYLGRSLDTLLDRAETYRKDYGDEFISIEHLILGYVKDDRFGKNLLQEFKLDEAKLKDIITQVRGKNKVTDQNPEGK
YEALEKYGRDLTEAARQGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIITGDVPQSLKDRQL
ISLDMGALIAGAKFRGEFEERLKAVLKEVTDSNGKVILFIDEIHTVVGAGATQGSMDAGNLLKPMLARGELRCIGATTLD
EYRKYLEKDAALERRFQQVYVDQPTVEDTVSILRGLKERYEVHHGVKISDSALVAAATLSTRYISDRFLPDKAIDLVDEA
AAKLKMEITSKPEELDEIDRRILQLEMERLSLQKESNVASIERLERLEKDLANLKEQQSALNAQWQSEKGVIGSIQKIKE
QIDKVNIEIQQAELKYDLNRAAELKYSKLTELQKQLQQAESQLSATQTTGKTLLREEVTEGDIAEIISKWTGIPISKLVE
SEMQKLLHLEDELHKRVIGQDEAVTAVADAIQRSRAGLADPNRPVASFIFLGPTGVGKTELAKALAAYLFDTEEAIVRID
MSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNIMLQILDDGRVTDAQGHTVDFKNSV
IIMTSNVGSQYILDVAGDNELMRSRVMEAMRGTFRPEFLNRIDEMIIFHGLSKTELRQIVLLQVKRLEKRLADRKMSLKL
SESAIDFLAEIGYDPVYGARPLKRGIQRELETQMAKGILRGDFADGDTIFVDIENERLAFKRLPAGLVTAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 5e-109 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 4e-109 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Osc7112_3868 YP_007116625.1 ATP-dependent chaperone ClpB VFG2084 Protein 5e-115 44
Osc7112_3868 YP_007116625.1 ATP-dependent chaperone ClpB VFG2076 Protein 2e-127 43