Gene Information

Name : Osc7112_2669 (Osc7112_2669)
Accession : YP_007115499.1
Strain : Oscillatoria nigro-viridis PCC 7112
Genome accession: NC_019729
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3124687 - 3127164 bp
Length : 2478 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; UvrB/uvrC motif; ATPase family associated with various cellular activities (AAA); COGs: COG0542 ATPase with chaperone activity ATP-binding subunit

DNA sequence :
ATGTTTGAACGCTTCACAGAAAAAGCAATAAAAGTAATCATGTTGGCCCAGGAAGAAGCTCGCCGCCTGGGTCACAACTT
CGTAGGGACAGAACAGATCCTCCTGGGTCTGATCGGTGAAGGAACCGGGGTGGCAGCTAAAGTCCTCAAATCAATGGGGG
TCAATCTCAAAGACGCTCGGATTGAGGTCGAAAAAATCATCGGGCGCGGTTCCGGCTTCGTAGCAGTCGAAATTCCGTTC
ACCCCCCGCGCCAAGCGGGTTCTAGAATTATCCCTAGAAGAAGCTCGCCAACTCGGACACAACTATATAGGTACTGAACA
CCTGCTGCTGGGCCTGATCCGCGAAGGTGAAGGAGTAGCGGCCAGAGTATTAGAAAACCTGGGAGTAGACTTGTCGAAAG
TCCGCACCCAAGTCATTCGGATGCTGGGAGAAACCGCAGAAGTCGCAGCCACCGGCGGAGGTGCCCGCACCAAAACCCCA
ACCCTCGATGAATTCGGTGCCAACCTCACTCAAATGGCGGTCGATGGCAAACTAGACCCAGTAGTCGGACGCCAAAAAGA
AATCGAACGGGTAATTCAAATCCTCGGTCGCCGCACCAAAAATAACCCGGTGCTAATCGGCGAACCCGGAGTCGGTAAAA
CCGCGATCGCCGAAGGTCTGGCCCAGCGCATCGCTAACAACGACATCCCAGATATCCTCGAAGAAAAGCGCGTCGTTACC
CTCGACATCGGCTTGCTCGTTGCCGGCACGAAATACCGGGGCGAATTTGAAGAACGCCTCAAAAAAATCATGGACGAAAT
CCGCACAGCGGGTAACGTGATTTTGGTGATTGACGAAGTGCACACTTTGATCGGTGCGGGTGCTGCTGAAGGGGCGATCG
ACGCCGCCAACATTCTCAAGCCGGCTTTGGCAAGAGGCGAGCTCCAGTGTATCGGCGCCACCACCCTCGACGAGTACCGC
AAGCACATCGAGCGCGACGCAGCCTTAGAACGGCGCTTCCAGCCCGTCATGGTCGGCGAACCCACCGTGGACGAGACGAT
CGAGATTCTCTTCGGTCTGCGGGAACGCTACGAACAGCACCACAAGCTGAAAATTTTGGACACGGCCCTGGAAGCCGCCG
CCAAACTCTCACATCGGTATATCTCCGACCGCTTCCTCCCAGACAAAGCAATTGACTTGGTAGACGAAGCTGGTTCCAGA
GTCCGCCTGATCAACTCCCAACTGCCCCCCGCAGCTAAAGAACTGGACAAAGAACTGCGCCAAGTCCTCAAAGACAAAGA
CGAAGCGGTGCGTTCTCAAGACTTTGACAAAGCCGGCGAATTGCGCGATCGAGAAATGACGATCAAAGCCGAAATTCGCG
CTATTTCCCAAGCCAAAAAAACCGACTCGGCCCGCACCGGCGAAACCGACCCATCGCCAGTTGTCACCGAAGAAGATATC
GCTCAAATCGTGGCAAGCTGGACGGGCGTACCGGTTAACAAACTGACCGAATCTGAATCCGAAAAGCTGCTGCACATGGA
AGATACCTTGCACCAGCGCTTGATCGGCCAGGAAGAAGCAGTGAAAGCCGTTTCCCGCGCCATCCGCCGCGCTCGCGTCG
GCTTAAAAAATCCCAATCGCCCGATCGCCAGTTTCATCTTCTCCGGGCCCACAGGCGTCGGCAAAACCGAACTCACCAAA
GCCCTAGCCGGCTACTTCTTCGGTTCCGAAGACGCGATGATTAGGCTGGATATGTCGGAGTACATGGAACGTCACACCGT
CTCCAAACTCATCGGTTCCCCTCCGGGCTACGTCGGCTACAACGAAGGCGGCCAACTCACAGAAGCAGTCCGCCGCCGTC
CTTACACCGTGGTGCTGTTCGACGAAATCGAAAAAGCCCACCCCGATGTCTTCAATATGCTGTTGCAAATATTGGAAGAC
GGCCGCTTAACAGATGCCAAAGGTCGCACCGTGGACTTCAAAAACACGCTGCTGATTATGACCTCAAACATTGGTTCTAA
GGTGATTGAAAAAGGCGGCGGCGGTCTCGGCTTCGAGTTCAGCGACAACCAAGCCGATGCTAATTACAACCGCATTCGTT
CTTTGGTTAACGAAGAACTCAAAAACTACTTCCGCCCCGAATTCCTCAACCGACTCGACGAAATTATCGTCTTCCGCCAG
TTGAACAAGGAAGAAGTCAAGGAAATCGCGGTCATCATGCTAAAAGAAGTGTTCGGCCGTTTGACAGAACAGGGAATCAC
CCTGGAAGTGACCGAAAAATTCAAAGAACGGCTGGTAGAAGAAGGCTACAACCCCAGCTACGGAGCTCGACCCCTGCGCC
GCGCCATTATGCGCTTGCTGGAAGACAGCTTGGCTGAGGAAATCCTTTCTGGCCGCATCAAAGACGGCGACACCGCTGTT
GTGGATGTGGGCGAGGACGGAATTGTTAAGGTGCTGCAAGGTCAAAAGCGGGAATTGCTGCCCCAAGGCGCCGAGTAA

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVAATGGGARTKTP
TLDEFGANLTQMAVDGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDIPDILEEKRVVT
LDIGLLVAGTKYRGEFEERLKKIMDEIRTAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR
KHIERDAALERRFQPVMVGEPTVDETIEILFGLRERYEQHHKLKILDTALEAAAKLSHRYISDRFLPDKAIDLVDEAGSR
VRLINSQLPPAAKELDKELRQVLKDKDEAVRSQDFDKAGELRDREMTIKAEIRAISQAKKTDSARTGETDPSPVVTEEDI
AQIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTK
ALAGYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILED
GRLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSDNQADANYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQ
LNKEEVKEIAVIMLKEVFGRLTEQGITLEVTEKFKERLVEEGYNPSYGARPLRRAIMRLLEDSLAEEILSGRIKDGDTAV
VDVGEDGIVKVLQGQKRELLPQGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Osc7112_2669 YP_007115499.1 ATPase AAA-2 domain protein VFG0079 Protein 0.0 61
Osc7112_2669 YP_007115499.1 ATPase AAA-2 domain protein VFG0080 Protein 9e-154 53
Osc7112_2669 YP_007115499.1 ATPase AAA-2 domain protein VFG2084 Protein 2e-91 41