Gene Information

Name : Osc7112_1235 (Osc7112_1235)
Accession : YP_007114195.1
Strain : Oscillatoria nigro-viridis PCC 7112
Genome accession: NC_019729
Putative virulence/resistance : Unknown
Product : Tex-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1440858 - 1443092 bp
Length : 2235 bp
Strand : +
Note : PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; COGs: COG2183 Transcriptional accessory protein; InterPro IPR018974:IPR003029:IPR006641:IPR022967; KEGG: npu:Npun_R5425 R

DNA sequence :
ATGACTGTTCCGAAATTCTGCACTATGATCGACATTCCTCAACTGATTGCTCGAGAACTTTCCATTAATCTGTCTCAAGT
CAATAATGCTCTGGAACTTTTCGCCGAGGGAGCAACTATTCCGTTTATTGCCCGCTACCGCAAAGAACGCACGGATTTGC
TGAATGAAATTCAGTTGCGGGATATCTCCGATCGCTTCACATATTTGACGGAAATTGAAGAGCGGAAAAAGTCGATTTTA
GATACGATTAGCTCTCAGGGGAAACTCACTGAAGAACTGCAAGCAAAAATCGAATCGTGTTTGCAAAAAAACGAACTAGA
AGACCTGTATCTGCCTTACAAACCAAAGCGGCGGACGCGAGCGACAATTGCTAGGGAAAAAGGTTTGGAACCGCTGGCAA
ATTTTATCCAATGTCTGAATTTACCGACGGCTAAACCAGCAGATTTTGAGGCGGAGGCAGCTAAATACATTTCGGAAGAA
AAGGGAGTGAAAACAGCAGAAGAAGCTCTCAAAGGTGCTGCGGATATTTTGGCGGAAGCGGTTTCGGAAAAAGCTGAATT
GCGGGCTTACTTGCGAGAGTTTTTGATGAAAACGGGAGTTTTTGTCTCGAAAATTAAAGAGGATTTCCCGGAAGGAAGCA
CTAAATTTGAAATGTACCGCAATTACCAAGTTGCAGCGAGAAGCGTTCAGTCGCACAATATGTTAGCGCTGTTTCGCGGG
GAAACGGAAGGGGTTTTAGATTTGGAACTGGGCTTTGATGAATCCGCAGTGATGGCTTATTTGGAATCTCAGGAAATTAG
AACTAGGATACCGGAAGTTAAAGAGTTTTATCAATCGACTTTGAAGGATGCCTTCAACCGACTGATGAAGACTTCGTTAA
TTACAGAAGTACGATCGCACAATAAAGCCGCCGCCGATATCGAGTCGATCGCCACTTTTGAAACCAACCTCCGCGAGTTG
CTGCTGTCGGCGCCGGCGGGAATGAAACCCACATTGGCGATCGATCCGGGATTTCGCACGGGCTGCAAAGTTTCCGCCCT
AGATGAAACCGGGCAATTTTTAGAATATCAAGCAATTTTTCCGCACCAAGCTGCAGCTCAGCGACAGCAAGCTGGTAAAA
TTGTCAAGCATTTAATTGAAAAATATAAAATTGAATTAATCGCGATCGGTAACGGTACAGCTTCCCGGGAAACAGACGAA
TTTGTTTCGGAAGTTTTGGCCGAAATGGAAAGAAAACCGATTAAAGTCATGGTGAATGAATCCGGTGCATCGATTTATTC
AGCAAGCGAGGTGGCGATCGCCGAATTTCCCGATCTCGACATCACCGTCCGCGGCGCAGTCAGCATCGGACGGCGCTTGC
AGGACCCCCTCGCCGAACTCGTGAAAATCGACCCGAAATCAATAGGAGTCGGTCAATACCAGCACGACGTTGACCAAAAA
CTGCTCAAAAAGAAACTCGACGAAACAGTCGAAAGCTGCGTTAATTATGTCGGAGTTGACTTAAACACAGCCTCCAAAGA
ACTGCTGACATTTGTGTCGGGAATGACGGCAACAGTTGCCAAAAATATCGTCAATTACCGCAACGAAAACGGCGCATTTA
AAAATCGCCGCCAACTCCTGAAAGTTCCCAAACTCGGGCCAAAAGCTTTTGAACAAGCAGCGGGATTTCTCCGCATTCGC
GGCGGCGAAAACCCCCTAGACAATACAGCAGTTCATCCCGAAAGTTATCCTGTAGTGCAGGCGATCGCCAAGGATTTAGA
CTTGCCGCTGACAGAAATAACACAAATATCGGAAAAAATCAAGACTGTAAACATCAAGAAATATGTCACAGAAAAAGTCG
GAGAACCCACACTCCGAGACATTATTTCCGAACTAGAAAAACCGGGCAGAGACCCGCGCGCCGAGTTTAAATATGCCACT
TTCCAAGCAGGAATCAAAGAAATCTCCGATTTGCAAGTTGGGATGGAATTAGAAGGCATAATCACAAATGTAGCTAACTT
TGGAGCCTTTGTTGATGTGGGAGTGCACCAAGATGGTTTGGTTCACATTTCTCAATTAGCCGATCGATTCGTGGAAGATC
CGAAACAGATTGTTAAAGTCGGACAAGTTGTGAAAGTGCGGGTTTTGGAGGTGAATGAGAAGTTAAAGCGGGTTAGTTTG
ACGATGAAGCTGCAAGAAAAACCGCAACCGCAAAATGGCAATAGCGCGAGGCTTCCGGCCCCGCGCCGACGTTGA

Protein sequence :
MTVPKFCTMIDIPQLIARELSINLSQVNNALELFAEGATIPFIARYRKERTDLLNEIQLRDISDRFTYLTEIEERKKSIL
DTISSQGKLTEELQAKIESCLQKNELEDLYLPYKPKRRTRATIAREKGLEPLANFIQCLNLPTAKPADFEAEAAKYISEE
KGVKTAEEALKGAADILAEAVSEKAELRAYLREFLMKTGVFVSKIKEDFPEGSTKFEMYRNYQVAARSVQSHNMLALFRG
ETEGVLDLELGFDESAVMAYLESQEIRTRIPEVKEFYQSTLKDAFNRLMKTSLITEVRSHNKAAADIESIATFETNLREL
LLSAPAGMKPTLAIDPGFRTGCKVSALDETGQFLEYQAIFPHQAAAQRQQAGKIVKHLIEKYKIELIAIGNGTASRETDE
FVSEVLAEMERKPIKVMVNESGASIYSASEVAIAEFPDLDITVRGAVSIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQK
LLKKKLDETVESCVNYVGVDLNTASKELLTFVSGMTATVAKNIVNYRNENGAFKNRRQLLKVPKLGPKAFEQAAGFLRIR
GGENPLDNTAVHPESYPVVQAIAKDLDLPLTEITQISEKIKTVNIKKYVTEKVGEPTLRDIISELEKPGRDPRAEFKYAT
FQAGIKEISDLQVGMELEGIITNVANFGAFVDVGVHQDGLVHISQLADRFVEDPKQIVKVGQVVKVRVLEVNEKLKRVSL
TMKLQEKPQPQNGNSARLPAPRRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 2e-163 50