Gene Information

Name : GEI7407_0579 (GEI7407_0579)
Accession : YP_007108129.1
Strain : Geitlerinema sp. PCC 7407
Genome accession: NC_019703
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 705533 - 706300 bp
Length : 768 bp
Strand : +
Note : PFAM: ABC transporter; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: cyp:PCC8801_2484 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter-like pr

DNA sequence : 
ATGGGAACCCTCGCCTTTCCAAACCTGCGCTCGATGCCGATGCTGACGGTGGAGCACCTGGATGTGCGCTATCGGGACGT
TCACGCCCTCAGTGACGTCAGCCTTCGGATTGCGCCCGGTCGCCTGACGGGCATCATCGGCCCCAACGGGGCCGGCAAGA
GCACGCTGATGAAAAGCTTGCTGGGACTGGTTCCCATGACGGCGGGCGAGGTGATCTACGGCGATCGCCCCCTGGTCGAG
CAGCGGCAGCGCGTGGCCTACGTGCCCCAGCGCACCCAGATCGACTGGCAATACCCCGCGACGGTCTGGGATGTGGTGAT
GATGGGCCGAGTGCGGCAGTCGGGCTGGTTTCGGCGGTTCTCGGCGGTGAGTCGGCAGGCGGCCCTGGCGGCCCTAGAGC
GCGTGGGCATGGCCGAGCTTCGCGATCGCCCGATTGGTCAGCTGTCGGGCGGCCAGCAGCAGCGCGTCTTTTTGGCTCGG
TCCCTGGCCCAGGAAGCCGACATTTTCTGCTTTGACGAGCCCTTTGTGGGCGTGGACCAAAAAACCGAGGCGATCCTGTT
TGGGATTTTTCAGGAGCTCGCCGCCGAGGCCAAGATCGTGCTGGTGGTCAACCACGACCTCGGAGAGTCGATCACCCATT
TTGACGATCTGGTGCTGCTCAATCGCACGTTGCTGGCCCACGGACGGCGCCAGGAGGTGCTCAACCGCGACAATCTGGAC
CGGGCCTATGGCGGGCGGGTCCAGTTCTTTGCGGCGGGGGCGGCTTGA

Protein sequence : 
MGTLAFPNLRSMPMLTVEHLDVRYRDVHALSDVSLRIAPGRLTGIIGPNGAGKSTLMKSLLGLVPMTAGEVIYGDRPLVE
QRQRVAYVPQRTQIDWQYPATVWDVVMMGRVRQSGWFRRFSAVSRQAALAALERVGMAELRDRPIGQLSGGQQQRVFLAR
SLAQEADIFCFDEPFVGVDQKTEAILFGIFQELAAEAKIVLVVNHDLGESITHFDDLVLLNRTLLAHGRRQEVLNRDNLD
RAYGGRVQFFAAGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 6e-45 45
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 7e-45 45
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-42 43
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-42 43
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 5e-43 43
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-43 43
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-43 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEI7407_0579 YP_007108129.1 ABC transporter BAC0400 Protein 4e-48 48
GEI7407_0579 YP_007108129.1 ABC transporter BAC0350 Protein 2e-43 43
GEI7407_0579 YP_007108129.1 ABC transporter BAC0440 Protein 1e-41 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEI7407_0579 YP_007108129.1 ABC transporter VFG0526 Protein 2e-43 43