Gene Information

Name : GEI7407_0396 (GEI7407_0396)
Accession : YP_007107949.1
Strain : Geitlerinema sp. PCC 7407
Genome accession: NC_019703
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 474543 - 475979 bp
Length : 1437 bp
Strand : -
Note : PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; COGs: COG0469 Pyruvate kinase; InterPro IPR015793:IPR015794:IPR001697; KEGG: ate:Athe_1266 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase a

DNA sequence :
ATGCGCAAAACCAAAATCATTTGCACCCTCGGTCCTGCCAGTAATACCTACGAGACGATCCGGGAAATGGCGATCGCCGG
GATGGACATCGTCCGGCTCAATTTTTCCCACGGAGAGCACGCCACCCACGAGCGATCCATTGAGCTCGTGCGCCAAGTTG
CTGCCGACATCCAGCGCCCGATCGCCATCCTCCAAGACCTGCAAGGCCCAAAAATTCGGGTCGGCGATATGGAAGACGGG
GTCGAGCTGCTGCCCGGCGAGAAGACCGTTATCACCATGGAGGACGTTCTCGGCACAGCGGCCCGCTTTAGCTCGACCTA
CAAGGGGCTGGCCACCGATGTCCGCAGCGGCGACCCCATCTTGATCAACGACGGCATGCTGAAGCTGCGGATCAATCAGG
TGATCGGCCAAGACATTCACGCTACGGTGATCGACGGCGGCCCGCTCCTGAGCCACAAGGGGATCAACCTGAGTCAATCC
TCGATCAGCACGCCGGCCCTGACGGAAAAGGACGTAGAAGACCTCTACTTTGGCCTCAAGCAAAACCTCGACTACGTGGC
GCTGTCCTTTGTGCGGGAGGCTGCCGACCTCAAGGAGGTCCAGGGAACGGTGCGCCGGAAAAACAAGCACGCCCACGCGA
TCGCCAAGATCGAGCGCCACGAAGCCGTGGAGGACCTCGAGGCGATCGTGGCCGCAGCAGACGCGGTGATGGTTGCCCGG
GGCGACCTGGGCGTCGAGATGCTGCTGGAGCAGGTGCCCCTGATTCAGAAGTCCATCATCAACACCTGTCGCCGCCACCT
CAAGCCTGTGATCACCGCCACCCAGATGCTGGAGTCGATGATCCAAAACCCTCGGCCCACCCGCGCCGAGGTTTCTGATA
TTGCCAATGCCATCCTCGACGGCACCGACGCCTTGATGCTGTCTGGGGAGACGGCCGTGGGGGCTCATCCCGTGGAGGCT
GTACGGACCATGGCCCAAATTGCCGAAACCGTTGAGCCGCAGCTCCACAGCGTCGATACCTACATTGATGGCCTGCGGGA
GCACAGCGCCGCCAATTCTGTGGTCCACGCGGCCTGTCGCCTCGCCGACAACCTGAGGGCAAAGGCGATTATTTGCTTTA
CAGAGCACGGATTTACGGCGCGGCTCCTGTCGAAGTACCGCCAGCCAATCCCTGTGATTGCGGTGACCCGCAGCCCCGAG
GTCCAGCGCCGGATGTCGCTGTACTGGGGCGTGCGATCGCTCCTGCTTGAGGAGGTCTCGAGCACCGACGAAATGATCGC
TCAGGTGGAAAAACTCGCCCTGGAGAGCCGCATGGTCGACGAAGGCGACATGACCGTCATCACCGCTGGTCTGCCGCTGC
CGATTACGGGAGTAACGAACCTGATCAAGGTTCATCGCATCGGCGAAGCCGCCTCTTTCAACTCGACGTTTCCATAG

Protein sequence :
MRKTKIICTLGPASNTYETIREMAIAGMDIVRLNFSHGEHATHERSIELVRQVAADIQRPIAILQDLQGPKIRVGDMEDG
VELLPGEKTVITMEDVLGTAARFSSTYKGLATDVRSGDPILINDGMLKLRINQVIGQDIHATVIDGGPLLSHKGINLSQS
SISTPALTEKDVEDLYFGLKQNLDYVALSFVREAADLKEVQGTVRRKNKHAHAIAKIERHEAVEDLEAIVAAADAVMVAR
GDLGVEMLLEQVPLIQKSIINTCRRHLKPVITATQMLESMIQNPRPTRAEVSDIANAILDGTDALMLSGETAVGAHPVEA
VRTMAQIAETVEPQLHSVDTYIDGLREHSAANSVVHAACRLADNLRAKAIICFTEHGFTARLLSKYRQPIPVIAVTRSPE
VQRRMSLYWGVRSLLLEEVSSTDEMIAQVEKLALESRMVDEGDMTVITAGLPLPITGVTNLIKVHRIGEAASFNSTFP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 1e-57 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 6e-69 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 6e-69 41
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-69 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEI7407_0396 YP_007107949.1 pyruvate kinase VFG0479 Protein 2e-69 41