Gene Information

Name : GEI7407_3618 (GEI7407_3618)
Accession : YP_007111137.1
Strain : Geitlerinema sp. PCC 7407
Genome accession: NC_019703
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4410751 - 4413411 bp
Length : 2661 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activi

DNA sequence :
ATGCAGCCCACCGACCCGACTCGCTTCACCAACAAAGCCTGGGACGCCATCGTAGAGTCCCAGGACGTGGCTCGACGCTG
CAAAAATCAGCAGCTTGAGGTAGAGCACCTGATCACGGCGCTCCTGGAGCAAGAGAAGGGCCTGGCGCTCAATATCCTAG
AGCGCGCGGGCGTGGACATCAGCCGCCTCACCCAGCAGATCGAGCTGTTTGTCCAGCGGCAGGCGCGCGTCTCCGAAGTG
TCGCAGCTCTATCTGGGCCGGGGACTCGACATCCTGCTCGATCGCGCTGAGGCTGCCCGCCAGACCTGGCAGGACGAATT
TATTTCCATCGAGCACATGCTGCTGGCCTTCACGGAGGACGAGCGGGTGGGCCGCCGCCTGTGCCGGATGCTGAACCTCG
AAAAGCCAGCCCTAGAAGCAGCAATCAAGTCGATTCGCGGCAGCCAGAAGGTCAGCGACCAAAACCCCGAGTCTCGCTAC
GCCGCCCTGGAAAAGTACGGCCGCGACCTGACGGAGCAGGCCAGAGCGGGCAAGCTCGACCCGGTGATCGGGCGGGATGA
CGAGATCCGCCGAGTGATCCAGGTCCTGTCGCGGCGGACCAAGAATAACCCGGTGCTGATCGGTGAGCCGGGCGTCGGTA
AAACGGCGATCGCCGAAGGACTGGCCCAGCGCATTCTCAACGGCGACGTCCCCGAGTCCCTGAAAAACCGCCAGCTCATC
TCTCTGGACATGGGTTCCCTGATCGCCGGTGCCAAGTATCGCGGCGAATTCGAGGACCGTCTGCGGGCCGTGCTGCGGGA
AGTCACCCACTCCGACGGCCAGATCATCTTGTTCATCGATGAGCTGCACACCGTCGTAGGGGCCGGGGCTTCCCAGGGCA
CCATGGACGCGGGCAACCTGCTCAAGCCCATGCTGGCGCGGGGCGAGCTGCGCTGCATCGGCGCGACCACCCTCGACGAG
TACCGCAAGTACATCGAAAAAGACGCCGCCCTCGAACGCCGCTTCCAGCAGGTCGTGGTCGGCCAGCCCAGCGTCGAAGA
CACCATCTCCATCCTGCGCGGCCTCAAGGAGCGCTACGAAGTCCACCACGGCGTCAAAATTACCGACTCCTCGCTGGTGG
CGGCAGCCACGCTGTCGGACCGCTACATCAGCGATCGCTTTTTGCCCGACAAGGCCATTGACCTGGTCGACGAAGCGGCA
GCCAAGCTCAAGATGGAAATCACCTCCAAGCCCACAGAGCTGGAAACCGTCGATCGCCGCCTGATGCAGCTGGAGATGGA
AAAGCTCTCCATCGAAGGCGAAGGGGCACGCCCCGGCGCCACCGGTGCCTACCAGCCCTCCCAGGATCGCCTAGAGCGCA
TCCAGCAAGAGATCGCCGAGCTGCAAACCAAGCAGCAAGAACTCCACGATCAGTGGCAGGGCGAAAAGCAGCTGCTCGAA
GCCATCAACGCCATCAAGGAAGAAGAGGACCAGCTCCGCCTCCAGATCGAGCAGGCCGAGCGGGACTATGACCTGAACAA
GGCCGCCCAGCTCAAATACGGCCGTCTCGAAACTCTCCAGCGCGATCGCGAAGAAAAAGAAGCCCAGCTCCTGGAGATGC
AGACCCGGGGCTCCACCCTGCTGCGTGAGCAGGTCACCGAGGCCGACATCGCCGAAATCGTCGCGCGCTGGACCGGCATT
CCCGTCAATCGTCTGCTGGAATCCGAGCGTCAGAAGCTTTTGCAGCTCGAGTCCTATCTCCATCAGCGCGTGATTGGCCA
AGACGAAGCAGTAGAAGCCGTGGCCGCCGCCATTCGGCGGGCGCGATCGGGCATGAAAGACCCCGGCCGCCCCATTGGTT
CGTTCCTGTTTATGGGCCCCACCGGCGTCGGCAAAACCGAGCTGGCCCGCGCCCTGGCCCAGTCCCTCTTCGACACCGAA
GAGGCCCTGGTGCGCATCGATATGTCGGAGTACATGGAGAAGCATTCGGTGTCGCGGCTGATCGGAGCGCCACCGGGCTA
CGTGGGCTACGAGGAAGGCGGCCAGCTATCGGAGGCGGTGCGTCGCCATCCCTACTCGGTGGTGCTCCTCGACGAGGTCG
AAAAAGCCCACCCCGACGTGTTTAATATCCTGCTCCAGGTGCTCGACGATGGCCGCATCACCGACTCCCAGGGACGCTTG
GTGGACTTCCGCAATACCATCATCGTCATGACGAGCAACATCGGCAGCGATCGCATTTTGAACTTCGGCGGCGATGAGTC
CAAGTACGAAGAGATGCACAAGCAGGTCATGCAGGCCCTGCGGGGACACTTCCGGCCCGAGTTCCTCAACCGCGTCGATG
ACATCATTCTCTTCCACCCCCTCAGCCGCAAGGAGCTGCGCGCCATCGTCAGCATCCAGATCCGCCGGATCGAGCGTCTG
CTCGCCGACCAAAAGATCGCCGTCGAGGTGACCGAAGAGGCGCTCACCCACGTGGCCGAAGCGGGCTACGACCCCGTCTA
TGGCGCGCGGCCCCTCAAGCGAGCCATCCAGCGGGAGATCGAGAACCCCCTGGCCACCAAGCTCCTGGAGAACCTCTTCG
TGGAAGGGGACACCATCTGCGTGGCCGTCGAGGACGACAGCCTGATCTTCAGCAAAAAGGTCGCCGCTCCGGTCTCCGAA
CCCGAAGTCGTCTCAACCTAA

Protein sequence :
MQPTDPTRFTNKAWDAIVESQDVARRCKNQQLEVEHLITALLEQEKGLALNILERAGVDISRLTQQIELFVQRQARVSEV
SQLYLGRGLDILLDRAEAARQTWQDEFISIEHMLLAFTEDERVGRRLCRMLNLEKPALEAAIKSIRGSQKVSDQNPESRY
AALEKYGRDLTEQARAGKLDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRILNGDVPESLKNRQLI
SLDMGSLIAGAKYRGEFEDRLRAVLREVTHSDGQIILFIDELHTVVGAGASQGTMDAGNLLKPMLARGELRCIGATTLDE
YRKYIEKDAALERRFQQVVVGQPSVEDTISILRGLKERYEVHHGVKITDSSLVAAATLSDRYISDRFLPDKAIDLVDEAA
AKLKMEITSKPTELETVDRRLMQLEMEKLSIEGEGARPGATGAYQPSQDRLERIQQEIAELQTKQQELHDQWQGEKQLLE
AINAIKEEEDQLRLQIEQAERDYDLNKAAQLKYGRLETLQRDREEKEAQLLEMQTRGSTLLREQVTEADIAEIVARWTGI
PVNRLLESERQKLLQLESYLHQRVIGQDEAVEAVAAAIRRARSGMKDPGRPIGSFLFMGPTGVGKTELARALAQSLFDTE
EALVRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQLSEAVRRHPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRL
VDFRNTIIVMTSNIGSDRILNFGGDESKYEEMHKQVMQALRGHFRPEFLNRVDDIILFHPLSRKELRAIVSIQIRRIERL
LADQKIAVEVTEEALTHVAEAGYDPVYGARPLKRAIQREIENPLATKLLENLFVEGDTICVAVEDDSLIFSKKVAAPVSE
PEVVST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-105 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEI7407_3618 YP_007111137.1 ATP-dependent chaperone ClpB VFG2076 Protein 1e-117 43
GEI7407_3618 YP_007111137.1 ATP-dependent chaperone ClpB VFG2084 Protein 4e-118 42