Gene Information

Name : GEI7407_3125 (GEI7407_3125)
Accession : YP_007110645.1
Strain : Geitlerinema sp. PCC 7407
Genome accession: NC_019703
Putative virulence/resistance : Unknown
Product : hydroxymethylpyrimidine synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3842084 - 3843469 bp
Length : 1386 bp
Strand : -
Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: cyc:PCC7424_1908 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: Phosphomethylp

DNA sequence :
TTGAATATGCGTTCTGAGTGGATCGCCAAGCGTCGCGGCCAAGCAAACGTGACGCAGATGCATTATGCCCGTCAGGGCCT
GATCACTGAGGAGATGACCTATGTCGCCCAGCGGGAAAACCTGCCCGCTGACCTGATCCGCGACGAAGTGGCTCGGGGCC
GCCTGATCATCCCTGCCAACATCAACCACCCCAACCTGGAGCCGATGGCCATCGGTATCGCCTCCAAGTGCAAAGTCAAC
GCCAACCTCGGCGCCTCGCCCAACTCCTCGGACATCGAAACCGAGCTCGACAAGCTGCGGCTGGCGGTGAAGTACGGCGC
TGACACCGTCATGGACCTGTCCACTGGTGGCGGCGACCTCGACACCATCCGGACAGCCATCATCAATGCCTCTCCGGTGC
CCATCGGGACGGTGCCCATCTACCAGGCCGTCGAGAGCGTCCACGGTCGTATCGAGAACCTGACCGCCGATGACTTCCTG
CACATCATCGAGAAGCACGCTCAGCAGGGGGTGGACTACATGACCATCCACGCGGGCCTGCTGATCGAGTACCTGCCCAT
GGTGCGCAGCCGGATCACCGGCATCGTGTCGCGCGGCGGCGGCATCATTGCCAAGTGGATGCTGCACCACCACAAGCAAA
ACCCCCTCTACACCCACTTTGACGACATCATCGAGATCTTCAAGAAGTATGATGTCTCCTTCAGCCTCGGTGACTCTCTG
CGTCCGGGCTGCACCCACGATGCTTCTGACGAGGCGCAGCTCTCGGAGCTGAAGACCCTCGGTCAGCTGACCCGCCGCGC
CTGGGAGCACGATGTCCAGGTGATGGTAGAAGGGCCTGGCCACGTGCCCATGGACCAAATTGAGTTCAACGTGCGCAAGC
AGATGGAGGAGTGCTCCGAAGCGCCTTTCTATGTGCTGGGGCCGCTGGTGACGGACATCGCACCGGGCTACGACCACATC
ACCTCGGCGATCGGGGCGGCAATGGCGGGCTGGTACGGCACGGCGATGCTGTGCTACGTGACGCCCAAGGAGCACCTGGG
CCTGCCCAACGCAGAGGACGTGCGCAATGGCTTGATCGCCTACAAGATCGCGGCCCACGCGGCGGACATTGCGCGTCACC
GGCCGGGCGCGCGCGATCGCGATGATGAGCTGTCGCGGGCTCGCTACAACTTTGACTGGAATCGCCAGTTTGAGCTGTCC
CTCGATCCGGAGCGGGCGCGGGAGTACCACGACGAGACCCTGCCAGCCGACATCTACAAGACCGCAGAATTCTGCTCGAT
GTGCGGTCCTAAGTTCTGCCCCATGCAGACCAAGGTGGACGAAGAAGCCCTGGTCGAGCTGGAGAAGTTCTTGGCCAAGG
AGCAGGTTCCGGCGACTCAGGGCTAA

Protein sequence :
MNMRSEWIAKRRGQANVTQMHYARQGLITEEMTYVAQRENLPADLIRDEVARGRLIIPANINHPNLEPMAIGIASKCKVN
ANLGASPNSSDIETELDKLRLAVKYGADTVMDLSTGGGDLDTIRTAIINASPVPIGTVPIYQAVESVHGRIENLTADDFL
HIIEKHAQQGVDYMTIHAGLLIEYLPMVRSRITGIVSRGGGIIAKWMLHHHKQNPLYTHFDDIIEIFKKYDVSFSLGDSL
RPGCTHDASDEAQLSELKTLGQLTRRAWEHDVQVMVEGPGHVPMDQIEFNVRKQMEECSEAPFYVLGPLVTDIAPGYDHI
TSAIGAAMAGWYGTAMLCYVTPKEHLGLPNAEDVRNGLIAYKIAAHAADIARHRPGARDRDDELSRARYNFDWNRQFELS
LDPERAREYHDETLPADIYKTAEFCSMCGPKFCPMQTKVDEEALVELEKFLAKEQVPATQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 6e-126 62
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 6e-126 62
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 8e-122 57