Gene Information

Name : GEI7407_3061 (GEI7407_3061)
Accession : YP_007110583.1
Strain : Geitlerinema sp. PCC 7407
Genome accession: NC_019703
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3769050 - 3769751 bp
Length : 702 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: ABC exporter ATP-binding subunit, DevA family; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: cyn:Cyan7425_5154 ABC transporter related; PFAM: A

DNA sequence : 
GTGAGCGGTGTTCATTCGGGTGCGATCTGCGCGCACAACATCGCGATGGTGTTTCAGGCTGGGGGTGAGCGTGTGCAAGC
CCTCAAGGATATCGACCTGACGGTGCAGACTGGGGATATTCAGCTGCTAATGGGGCCTTCTGGTTCGGGCAAGACGACTC
TGCTGTCAATTCTGGCAGGGCTGCTAACCCCAACGACTGGCTCGGTGCACCTCCTGGGCCAAGAGATCACGCGGATGTCG
CGATCGCGCCTAGCTCGCTTCCGCCTGAAGAACATTGGCTTTATTTTTCAGGGGTTCAATCTTTTCCCGGCTCTGACGGC
GATCGAGAATGTCGAGGTAGCCCTGCACATGAAGGGCATCCAAGGCCGCCAGGCGCGGGAGGAAGCCCGACATTTGCTGT
CCCAGGTAGACCTGAGCCACCGAGTGGACTATATGCCACGGGATCTGTCCGGCGGCCAAAAGCAGCGGGTGGCGATCGCA
CGGGCCTTGGCGGGCAGTCCCCAGCTCATCATGGCGGACGAACCGACGGCGGCGCTGGATTCCCACAGCGGCCATGCGGT
GATCGAGCTGCTGCGCAACCTGGCCAAGGACAGCGGGCGAACGGTGTTGATGGTGACCCACGATCCGCGAATTATCGACG
TGGCGGACCAGGTGCTGTATCTGGAAGATGGCTTGCTCAAGACGCCGCCCCAAGCGGTCTAG

Protein sequence : 
MSGVHSGAICAHNIAMVFQAGGERVQALKDIDLTVQTGDIQLLMGPSGSGKTTLLSILAGLLTPTTGSVHLLGQEITRMS
RSRLARFRLKNIGFIFQGFNLFPALTAIENVEVALHMKGIQGRQAREEARHLLSQVDLSHRVDYMPRDLSGGQKQRVAIA
RALAGSPQLIMADEPTAALDSHSGHAVIELLRNLAKDSGRTVLMVTHDPRIIDVADQVLYLEDGLLKTPPQAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEI7407_3061 YP_007110583.1 ABC transporter NC_012469.1.7686878. Protein 6e-42 43
GEI7407_3061 YP_007110583.1 ABC transporter NC_008702.1.4606598. Protein 1e-33 43
GEI7407_3061 YP_007110583.1 ABC transporter CP001581.1.gene798.p Protein 5e-36 42
GEI7407_3061 YP_007110583.1 ABC transporter CP001581.1.gene598.p Protein 1e-33 41