Gene Information

Name : GEI7407_2976 (GEI7407_2976)
Accession : YP_007110498.1
Strain : Geitlerinema sp. PCC 7407
Genome accession: NC_019703
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : 2.2.1.1
Position : 3661854 - 3663860 bp
Length : 2007 bp
Strand : +
Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast; COGs: COG0021 Transketolase; InterProIPR005474:IPR020826:IPR005475:IPR005476

DNA sequence :
ATGGCTGTCGCAACCCAATCCCTCGACGAACTCTGTATTAATGCAATTCGCTTTCTGGCCATTGATGCCGTAGAGAAAGC
AAAGTCTGGCCACCCGGGGTTGCCCATGGGCGCAGCACCGATGGCTTTCGTGCTGTGGGATCGCTTCATGCGGTTCAATC
CCAAGAACCCAACCTGGTTCAACCGCGATCGCTTTGTGCTGTCTGCGGGTCATGGCTGCATGCTGCAGTACGCCCTGCTG
CACTTAACCGGTTACGACAGCGTCACGCTAGACGACATCAAGAGCTTCCGCCAGTGGGGCTCGCGCACCCCGGGTCACCC
CGAGAACTTCGAGACCCTGGGCGTTGAAGTGACCACCGGCCCCCTCGGCCAAGGCATCGCCAACGCTGTGGGTCTGGCCA
TGGCAGAAGCTCACCTGGCTGCGCGCTTCAACAAGCCCGACAGCACCATCGTCGATCACTACACCTACGTGATCCTGGGT
GACGGCTGCAACATGGAGGGTATCTCGGGTGAGGCTTGCTCCTTGGCCGGTCACCTCGGCCTCGGCAAATTGATCGCCCT
CTACGACGACAACCACATCTCCATCGACGGCTCCACCGACGTCGCCTTCACCGAAGACGTTTCCAAGCGCTTTGAGGCCT
ACGGTTGGCACGTGCTGCACGTCGAGAACGGCAACACCGACCTCGCCGCAATCCAAAAGGCGATCGAAGAAGCGAAGGCC
GTCACCGACAAGCCTTCGATGATCAAGGTCACCACCACCATTGGCTATGGCTCCCCCAACAAGGCCGACACGGCTGGGGT
TCACGGCGCAGCGCTGGGCGGCGACGAAGTCAAGGCAACCCGTGAGAACCTGGGCTGGAACTATGAGCCCTTCAGCATCC
CTGACGATGTTCTGGGCCACTTCCGCAAGGCAGTTGAGCGGGGCGCAAGCAATGAAGCTGAGTGGCAAGAGGCTCTGGCT
GCTTACCGGACGAAGTATCCCGAAGAAGCCAAGGTTTTCGATCGCATCCTGACGGGCGAGCTGCCCGAGGGCTGGGACAA
GACCCTGCCCACCTACACCAGCCAAGACAAAGGCGTTGCCACTCGGAAGCACTCCGAAATCACGCTGAACGCTTTGGCTC
CGACCCTCACCGAGCTGCTGGGCGGCTCTGCTGACCTGACCCACTCCAACCTGACGGAGCTGAAGGTGAGCGGCGACTTC
CAGAAGGGCGCCTACGAAAACCGCAACATCCACTTTGGGGTGCGCGAGCACGCCATGGGTGCTATCTGCAACGGCCTTGC
CCTGCACACTCCGGGTCTGATCCCCTACTGCGCAACCTTCCTGGTCTTCGCAGACTACATGCGGGCAGCGATTCGTCTGT
CGGCGCTCTCCCAAGTGGGCGTCATCTATGTGATGACCCACGACTCCATCGGTCTGGGCGAAGACGGTCCTACCCACCAA
CCGGTTGAAACCGTTGCGTCTCTGCGCGTCATCCCCAACCTGCTGGTGATGCGTCCTGCGGACGGCAACGAGACCTCTGC
GGCTTACAAAGTAGCTGTGGAAAACCGGAAGCGGCCGACCCTGCTGGCCCTCTCTCGCCAGAACCTGCCCAACTACGATG
AGACCTCCTTCGAGGGTGTCGCGAAGGGCGCTTACATCATCTCTGACAGCGAGGGAACCCCGGACATCATTTTGATCGGT
ACGGGTAGCGAGCTGCAGCTGTGCGTGGAGGCAGCTAAGCAGCTGCGCGGCGAAGGCAAGAAGGTGCGCGTTGTCTCGAT
GCCTTGCTGTGAGCTGTTTAACGAGCAGAGCGCTGAGTACAAAGAGTCTGTGCTGCCCAAAGCCGTGACCAAGCGCGTGG
CTGTGGAAGCTGGCTCGACCTTCGGCTGGTGCCGCTATACGGGTAGCGAAGGCGCTGTGATCGGGATTGATCACTTCGGT
GCCTCTGCGCCCGGTAATGTGTGCCTTGAGAAGTTTGGCTTCACGGTCGAGAACGTCCTGGCAACCGCCAAGCAAGTTCT
GGGCTAG

Protein sequence :
MAVATQSLDELCINAIRFLAIDAVEKAKSGHPGLPMGAAPMAFVLWDRFMRFNPKNPTWFNRDRFVLSAGHGCMLQYALL
HLTGYDSVTLDDIKSFRQWGSRTPGHPENFETLGVEVTTGPLGQGIANAVGLAMAEAHLAARFNKPDSTIVDHYTYVILG
DGCNMEGISGEACSLAGHLGLGKLIALYDDNHISIDGSTDVAFTEDVSKRFEAYGWHVLHVENGNTDLAAIQKAIEEAKA
VTDKPSMIKVTTTIGYGSPNKADTAGVHGAALGGDEVKATRENLGWNYEPFSIPDDVLGHFRKAVERGASNEAEWQEALA
AYRTKYPEEAKVFDRILTGELPEGWDKTLPTYTSQDKGVATRKHSEITLNALAPTLTELLGGSADLTHSNLTELKVSGDF
QKGAYENRNIHFGVREHAMGAICNGLALHTPGLIPYCATFLVFADYMRAAIRLSALSQVGVIYVMTHDSIGLGEDGPTHQ
PVETVASLRVIPNLLVMRPADGNETSAAYKVAVENRKRPTLLALSRQNLPNYDETSFEGVAKGAYIISDSEGTPDIILIG
TGSELQLCVEAAKQLRGEGKKVRVVSMPCCELFNEQSAEYKESVLPKAVTKRVAVEAGSTFGWCRYTGSEGAVIGIDHFG
ASAPGNVCLEKFGFTVENVLATAKQVLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-155 55
tktA AAO17218.1 TktA Not tested tcd island Protein 2e-157 55