Gene Information

Name : GEI7407_2576 (GEI7407_2576)
Accession : YP_007110103.1
Strain : Geitlerinema sp. PCC 7407
Genome accession: NC_019703
Putative virulence/resistance : Resistance
Product : heavy metal translocating P-type ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3151370 - 3153295 bp
Length : 1926 bp
Strand : +
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterProIPR018303:IPR000150:IPR008250:IPR00583

DNA sequence :
ATGGTTGCAGCTCCCCCTCCTATCCCTCGATTTTCTAACCTTCTCAAGGATCACCCTGACGCAGGAGCGGCGATCGCCTG
CGCGGTGCTCGTCTTCCTAGGCTGGCAGATGCTCAACTTCGGCTGGCTGGGCATAGCCCTCTGGGTCCTGGCGGCAGCCT
ATGTGATCGGTGGGTTCGAGAGTGCCCGCGAGGGGCTCACCACCCTTTTTGAAGAAAAAGAACTGGACGTGGACCTGCTG
ATGATCGTGGCCGCGCTGGGAGCCGCAGGTCTGGGACTCTGGCGACGGGAGTATTACCTGATCGTCGATGGGGCGGTTCT
GATTCTGATTTTTGCGATCAGCGGGGCGCTAGAGGGGTACGCGATGCAGCGCACCGAGCGGAGCATCCAGGGTCTGATGA
GCCTCACCGCTGATACGGCGCGCGTGATGCGCAGCGGCCAGGAGCACATTCTTCCCGTTGCGGACCTCCAGATCGGCGAT
CAGGTGCTGGTGAAGCCGGGAGAACTGGTGCCAACCGATGGCTTGGTGATCGAAGGATTTAGCACGCTCAACCAGGCTTC
GATCACCGGAGAATCCATCCCGGTGGAAAGGACGATCGGCGATGAGGTCTTTGCAGGCACCCTCAACGGCAGCGGGGCGC
TGCGGCTAAAAATTCACCAGCCGCCCGAAAGTAGCTTGATTCAGCGGGTGATCCGTCTGGTGCAGCAAGCGCAAACGGAA
GCGCCCCCCTCTCAGCAGTTCATTGAGCGATTTGAGCGCGGCTACGCCAAGGTGATTGTGCTGGCCGGGATCTTGCTGGG
TACGCTGCCTCCCTTTCTGCTGGGCTGGAACTGGGAAGAGACGATCTACCGAGCCCTAATTTTTTTGGTAGTGGCATCTC
CCTGCGCTTTGATGGCTTCGATTATGCCTGCGCTGCTGTCGGGCATCGCCAATGGGGCGCGCCAAGGCATCTTGTTCAAG
AACGGGGCGCAGCTAGAGCAGATCGGGCGCGTGCGGGCGATCGCCTTTGACAAGACCGGAACGCTGACCACAGGCAACCT
GCAAGTCGTGAGCGTGCTCTCGGCCCAGCCCTCTACCAACAAACTTCTGCAAGTGGCGGCGGCGCTGGAAAGCTTGTCCG
AGCATCCCATCGGGGAGGCGATCGCCCAGTTCGCCCGCCAGCAAAACCTGACCTGGGCCGCCGCCGTGAACGTTCAGGCC
CGGGCGGGCCAGGGAATCACGGGAGACATCGAGGGTCAAGGCGCGATCGCGGGCAAAGCGGCCTTTGTCCAGGCACAGGT
CAGCACGGCGGCCCAACCCCTCCGAGAACAAAGCCAGCAGTGGGAAGCTGATGGCAAAACCGTGGTTTGGGTTGCCTACG
CCGGAGAAATCTTGGGCATCATCGCGGTGGCGGATACGGTGCGACCAGCAGCAGCCAAGGCGATCGCCCGATTGAAGCGG
TTAGGCGTTGAGCAGATTGTCATGCTGACAGGAGACAATTCGCGCACCGCCCACAGCATTGCTCAGCAGGTGGGAGTCGA
TCAGGTCTATGCAGAGCTCTTGCCCGAAGAGAAAGTAGACGTCATTCGCAAGCTCCAACAGCAGTATCAGTCCGTGGCCA
TGGTTGGCGACGGCATCAATGACGCTCCGGCCTTGGCACAGGCATCCGTTGGCATTGCCATGGGAGCCGCAGGCAGTGAC
GTGGCCCTGGAAACGGCAGATATTGTCTTGATGGCGGATCGCCTGGAGCGCCTAGAGCACGCGATTCGCCTGGGTCGGCG
CGCTCAAGGGGTGGTCAAGCAAAACATTGTGTTTGCCCTCAGTTTCGTGGTGATTTTGTTAATTGCAAACTTCGCCGGAG
ATATCACCTTGCCGCTGGGAGTGCTGGGGCACGAAGGCTCGACGGTGATCGTGACGCTGAGTGGGTTGCGATTGCTGAGA
GGGTGA

Protein sequence :
MVAAPPPIPRFSNLLKDHPDAGAAIACAVLVFLGWQMLNFGWLGIALWVLAAAYVIGGFESAREGLTTLFEEKELDVDLL
MIVAALGAAGLGLWRREYYLIVDGAVLILIFAISGALEGYAMQRTERSIQGLMSLTADTARVMRSGQEHILPVADLQIGD
QVLVKPGELVPTDGLVIEGFSTLNQASITGESIPVERTIGDEVFAGTLNGSGALRLKIHQPPESSLIQRVIRLVQQAQTE
APPSQQFIERFERGYAKVIVLAGILLGTLPPFLLGWNWEETIYRALIFLVVASPCALMASIMPALLSGIANGARQGILFK
NGAQLEQIGRVRAIAFDKTGTLTTGNLQVVSVLSAQPSTNKLLQVAAALESLSEHPIGEAIAQFARQQNLTWAAAVNVQA
RAGQGITGDIEGQGAIAGKAAFVQAQVSTAAQPLREQSQQWEADGKTVVWVAYAGEILGIIAVADTVRPAAAKAIARLKR
LGVEQIVMLTGDNSRTAHSIAQQVGVDQVYAELLPEEKVDVIRKLQQQYQSVAMVGDGINDAPALAQASVGIAMGAAGSD
VALETADIVLMADRLERLEHAIRLGRRAQGVVKQNIVFALSFVVILLIANFAGDITLPLGVLGHEGSTVIVTLSGLRLLR
G

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 6e-103 43
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 3e-102 41
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 3e-102 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEI7407_2576 YP_007110103.1 heavy metal translocating P-type ATPase BAC0092 Protein 0.0 88
GEI7407_2576 YP_007110103.1 heavy metal translocating P-type ATPase BAC0099 Protein 5e-92 42