Gene Information

Name : GEI7407_2567 (GEI7407_2567)
Accession : YP_007110094.1
Strain : Geitlerinema sp. PCC 7407
Genome accession: NC_019703
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3137672 - 3138370 bp
Length : 699 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: ana:all4750 tw

DNA sequence : 
ATGAATCTCCCGGCTTCCGCTGTCCATGATCCTTGCATTTTGCTGCTCGAGGCCGATGATCTGCTTGCCCAGCACATGAG
TCTGGATCTCAAAGAAGCAGGGTACGACGCCGTCGTGGCCCACGACGCCAGCACTGGACTCCAGCAGCTCTCGCAGCTCC
AGCCCGCCATGGTAGTGGTCGATCGCATGCTGGGGGGTGAGTCAGGGCTCCAGTTTTGCACGCAGCTGCGGGGATTGGGC
TTTCGGGTGCCGGTCCTGCTGCTGATGGCGCGCGACACCGTCGAAGACCGCATCGCCTGCCTCGAAGCAGGAGCCGACGA
CTATTTCCTCAAGCCCTATCGCACCGAAGAGTTCTTGCGGCTGCTGCGGCTCTATCTGCGGCCCGAGACCACCGGCAATG
AGCAGCTTCGCTTTGGGGAACTGGTCCTGGACCTGGCTACCCGGCGAGTGCTGCGCAATGGACGCACCATCGACCTGACG
ATGAAAGAATTTGACCTGCTGAAGTACCTGATGGAGCATCCACGGGAGGTCCTGACGCGGGAGCAAATCCTAGAGAATGT
CTGGGGCTACGACTTCATGGGCGAATCCAACGTGATTGAGGTCTATATTCGCTATCTGCGGCTGAAAATCGAGGACGAAG
GCGAAAAACGGCTAATTCAGACTGTGCGCGGCGTGGGCTATGTGCTGCGTGAACCTTAA

Protein sequence : 
MNLPASAVHDPCILLLEADDLLAQHMSLDLKEAGYDAVVAHDASTGLQQLSQLQPAMVVVDRMLGGESGLQFCTQLRGLG
FRVPVLLLMARDTVEDRIACLEAGADDYFLKPYRTEEFLRLLRLYLRPETTGNEQLRFGELVLDLATRRVLRNGRTIDLT
MKEFDLLKYLMEHPREVLTREQILENVWGYDFMGESNVIEVYIRYLRLKIEDEGEKRLIQTVRGVGYVLREP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEI7407_2567 YP_007110094.1 winged helix family two component transcriptional regulator BAC0083 Protein 4e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEI7407_2567 YP_007110094.1 winged helix family two component transcriptional regulator VFG1390 Protein 7e-43 46
GEI7407_2567 YP_007110094.1 winged helix family two component transcriptional regulator VFG1389 Protein 1e-36 42
GEI7407_2567 YP_007110094.1 winged helix family two component transcriptional regulator VFG0596 Protein 3e-28 41