Gene Information

Name : GEI7407_1746 (GEI7407_1746)
Accession : YP_007109285.1
Strain : Geitlerinema sp. PCC 7407
Genome accession: NC_019703
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2121628 - 2122482 bp
Length : 855 bp
Strand : +
Note : PFAM: ABC transporter; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR017871:IPR003439:IPR003593; KEGG: syn:slr1318 iron(III) dicitrate transport system permease protein; FecE; PFAM: ABC transporter rel

DNA sequence : 
ATGTTTGACTCTGATGCTCCTTCAGCTTTGGCAGCTCACCAGCTCACCCTGGCCTACGACGGCGCGGTGATCGTGCGGGG
GCTGGACCTGACGATTCCGCGTCAGCAGATCACCACCCTGGTCGGCCCCAACGGCTGCGGCAAGTCAACCCTGCTGCGCG
GGCTCGCCCGCCTGCTGCGGCCCCAGGCAGGCGCGGTGTACCTGGAGGGACGGGCGATCGCCCAGCTACCGGCCAAAGCT
CTGGCCAAACGGCTGGGCATCCTGCCCCAGAGCCCGGCGGCCCCCGAAGGTCTGACGGTGCGAGAGCTGGTGGCCCAGGG
CCGCTATCCCCACCAAGGCTGGCTCCAGCAGTGGTCCGCCGAGGATGAGCAAAAAGTCGAAGCGGCGATCACCACCACCC
ACCTCCAGGACTTCGCCAACCGCCCCCTCGACACCCTCTCCGGCGGCCAGCGCCAGCGCGCCTGGATCGCCATGGCCCTG
GCTCAGGACACCGAAATTTTGCTGCTGGACGAGCCCACCACCTACCTGGATCTAGCCCACCAGATCGAAGTCCTCGATCT
GCTCTACGACCTCAACTACCAGGCCCAGCGCACCATTGTGATGGTGTTGCACGACCTCAACTTGGCCGGTCGCTACAGCC
ACCACCTGGTGGCCCTCCGCCAAGGAGCCGTGATCGCCCAGGGGACGCCTGGGGAAGTCATCACTGAGGCCGTGATCAAA
GCGGTCTTCGATCTTGACAGTCGCGTGATCCGAGACCCCCTGACCAGCACGCCTCTGTGCGTGCCGATCAGCCGAACCAT
TGTTGCTTCTCAATCCACTTCAACGAAGACAATACTGAGAGCCGATAAAACTTAA

Protein sequence : 
MFDSDAPSALAAHQLTLAYDGAVIVRGLDLTIPRQQITTLVGPNGCGKSTLLRGLARLLRPQAGAVYLEGRAIAQLPAKA
LAKRLGILPQSPAAPEGLTVRELVAQGRYPHQGWLQQWSAEDEQKVEAAITTTHLQDFANRPLDTLSGGQRQRAWIAMAL
AQDTEILLLDEPTTYLDLAHQIEVLDLLYDLNYQAQRTIVMVLHDLNLAGRYSHHLVALRQGAVIAQGTPGEVITEAVIK
AVFDLDSRVIRDPLTSTPLCVPISRTIVASQSTSTKTILRADKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-69 53
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-59 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-55 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-62 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-62 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-62 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-62 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-62 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-62 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-52 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-52 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-52 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-52 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEI7407_1746 YP_007109285.1 ABC transporter BAC0164 Protein 5e-59 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEI7407_1746 YP_007109285.1 ABC transporter VFG0925 Protein 1e-63 50
GEI7407_1746 YP_007109285.1 ABC transporter VFG1042 Protein 4e-59 46