Gene Information

Name : GEI7407_0151 (GEI7407_0151)
Accession : YP_007107708.1
Strain : Geitlerinema sp. PCC 7407
Genome accession: NC_019703
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 171918 - 174386 bp
Length : 2469 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; UvrB/uvrC motif; ATPase family associated with various cellular activities (AAA); COGs: COG0542 ATPase with chaperone activity ATP-binding subunit

DNA sequence :
ATGTTTGAATACTTCACCGACAGAGCGGTTGCAGTCATTGTCTTTGCCCAAGAAGAAGCGCGCCGCCTCGGCCACAGTTT
TATTGGCACCGAGCAGATCTTGCTGGGCGTGCTCCGGGTGGAAAGCAGTCCGGCGGCTCGTCTCCTGACGGATATGGGCG
TGACGGCTGCCGCAGCGCGCCGCGAAGTCGAGGGAATTATTGGCCGGGGGTCGGGCATAGTGCCAGCGGACATTCCGCCG
ACGCCCCGCACGCGCCAGGTGTTTGAGCAGGCACTCCAGGGTGTGCAGCAAGAGTCCCAGGCCTACGTGACGCCGGAGCA
CATTTTGCTGAGCCTGGTCCAGGCGGGCGATAGCGTGGCGGCCAAGGTGCTGACCAATCTGGGAGTCGATCTGGCCGAGG
TGCGCGATCGCCTTCAGGCCCTGATGGCGGACCCGGCGGAAATGGCCTTTGCCCAGCCCAGCCGATCGGCCCAGACGGCG
GCTCCCATGGGCCGCGCCCTAGAAACGTTTGGCATCAACCTGACCATGCGGGCGATCGCCGGAGAACTGGACCCCATGGT
GGGCCGCGAAGCCGAAGTGGAGCGGGTGGTGCAGATTTTGGGCCGCCGCACGAAAAATAACCCGATTTTGCTGGGAGATC
CCGGCGTGGGCAAGACGGCGATCGCCGAAGGACTGGCCCAGCGGATTGTCAATGGCGACGTGCCGGAGATTTTGCGCGAT
CGCCAGATTATCAGTCTGGCCATGGGCACGCTGATGGCCGGAGCCCGCTTCCGGGGCGAGTTTGAAGAGCGTTTGACCCA
GATCTTGGCGGAGGTGCGCCAAGCGGGCAACGTGATTGTGTTCATCGATGAAATTCACTCCCTGGTCGGAGCGGGCGCGA
CGGCTGGGGGCCTCGACGCCTCCAACCTGCTGAAGCCAGCGCTGGCGCGGGGCGAGCTCCAGTGCATCGGCGCGACGACG
CTTGATGAGTACCGCCAGCACATCGAGCAGGATGCGGCCCTCGAGCGCCGATTTCAGCCGGTGAAGGTGGAAGCGCCCAC
CCTGACCGAGACCATCGAGATTCTCTGGGGGCTGCGCGATCGCTACGAGCAGCACCACCACCTCACCATCAGCAACGAAG
CTTTGGTGGCGGCGGCCCGCCTGTCCGATCGCTACATTCCCGATCGCCACCTTCCCGACAAGGCCATTGACCTGATCGAC
GAAGCGGGCTCTCGGGTGCGCCTGCGCCACACCCGCCACTCGCCCGCCCAGCGCATTCGCCAGGATCTGCGGGCCGTGAC
CGCCGAAAAAGAAGCGGCCGTAACGGCTCAGGACTTTGATCAGGCCGGGAAGCTGCGCGATCGCGAACTGGCGCTGCAGC
AAACCCTCGCGGACCTGCGCACTGCCCAGCGCGACGCCGAGCCCCGGCCCGTGGTGACCGCTGAGGACATCGCCCAGGTG
ATCTCGGCCTGGACCGGCATTCCGGTCAACCACCTCACCGAATCGGAGTCTCTGATGCTGATGCACCTCGAAGACACGCT
GCACGAGCGCGTCATCGGCCAGCAGGAAGCCGTCACAGCCGCCGCTCGCGCCATTCGGCGATCGCGCGTTGGCCTGGGCA
GCCCCCACCGGCCGATCGCCAGCCTGCTGTTTTCGGGACCGACGGGCGTCGGCAAGACGGAGCTGGCCAAGGCCCTCGCG
GCTACGGTTTTCGGCTCCGAGGAAGCCATGATCCGGCTGGATATGTCCGAGTTTATGGAGGCCCACACCGTCTCCAAGCT
CATCGGCTCGCCGCCGGGATTTGTGGGCTATGACGAGGGCGGCCAGCTCACCGAAGCCGTCCGGCGCAAGCCCTACACAG
TGCTGCTCCTCGACGAAATCGAAAAAGCCCACCCTGACGTCTTCAATTTGCTGCTGCAGCTGCTCGAAGATGGCCGACTG
ACCGACGCCCGGGGCCGAGTGGTCAGCTTCAAAAATACGCTGATTATCCTGACCTCCAATCTGGGCTCGCGGGCGATCGA
GAAGAATGGCCTGGGCCTGGGCTTTGCGGCCACAGGTGACGAGGCGGAAACGGCGCAGTACCAGCGGGTGCGATCGCAGG
TAAACGAAGAGCTAAAGCAGTACTTCCGGCCCGAGTTTCTCAACCGCCTCGACGAAATCATCGTTTTCCGCCGCCTCACC
CGCGACGAGCTCGCTCAGGTGGCCGAGCTGCTGATCCGGGAAGTGGGCGATCGCCTCAGCGAACAAGGCATCACCCTGGT
GCTGACCGACGCGGTGAAGCATCGCCTGATCGACGAGGGCTACAGCCCCAGCTACGGCGCGCGGCCCCTGCGCCGAGCCG
TAACGCGCCTGGTGGAAGATCACCTGGCCGAGGCCATGCTGGCGGGCCAGCTGCACAGCGGCGACACGGCGGTGCTGGAC
CTCGACGACGATGGTCAGGTTCAGGTGCGCGCTCGCACGCCGGTGCTCCAGTCGGTCTCAGCGCTCTAG

Protein sequence :
MFEYFTDRAVAVIVFAQEEARRLGHSFIGTEQILLGVLRVESSPAARLLTDMGVTAAAARREVEGIIGRGSGIVPADIPP
TPRTRQVFEQALQGVQQESQAYVTPEHILLSLVQAGDSVAAKVLTNLGVDLAEVRDRLQALMADPAEMAFAQPSRSAQTA
APMGRALETFGINLTMRAIAGELDPMVGREAEVERVVQILGRRTKNNPILLGDPGVGKTAIAEGLAQRIVNGDVPEILRD
RQIISLAMGTLMAGARFRGEFEERLTQILAEVRQAGNVIVFIDEIHSLVGAGATAGGLDASNLLKPALARGELQCIGATT
LDEYRQHIEQDAALERRFQPVKVEAPTLTETIEILWGLRDRYEQHHHLTISNEALVAAARLSDRYIPDRHLPDKAIDLID
EAGSRVRLRHTRHSPAQRIRQDLRAVTAEKEAAVTAQDFDQAGKLRDRELALQQTLADLRTAQRDAEPRPVVTAEDIAQV
ISAWTGIPVNHLTESESLMLMHLEDTLHERVIGQQEAVTAAARAIRRSRVGLGSPHRPIASLLFSGPTGVGKTELAKALA
ATVFGSEEAMIRLDMSEFMEAHTVSKLIGSPPGFVGYDEGGQLTEAVRRKPYTVLLLDEIEKAHPDVFNLLLQLLEDGRL
TDARGRVVSFKNTLIILTSNLGSRAIEKNGLGLGFAATGDEAETAQYQRVRSQVNEELKQYFRPEFLNRLDEIIVFRRLT
RDELAQVAELLIREVGDRLSEQGITLVLTDAVKHRLIDEGYSPSYGARPLRRAVTRLVEDHLAEAMLAGQLHSGDTAVLD
LDDDGQVQVRARTPVLQSVSAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEI7407_0151 YP_007107708.1 ATPase VFG0079 Protein 0.0 52
GEI7407_0151 YP_007107708.1 ATPase VFG0080 Protein 2e-160 52