Gene Information

Name : Syn7502_02532 (Syn7502_02532)
Accession : YP_007106638.1
Strain : Synechococcus sp. PCC 7502
Genome accession: NC_019702
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2505515 - 2507224 bp
Length : 1710 bp
Strand : -
Note : PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit

DNA sequence :
ATGAGTTATAGAATGAATCGCTCGGCATACGCGGAAACCTATGGCATTACGGTGGGCGATCGCCTGCGTCTAGCAGATAC
AGAATTAATCATTGAAGTGGAAAAAGACTACACCACCTACGGCGAAGAAGTAAAATTTGGTGGTGGCAAAGTAATTCGGG
ATGGCATGGGACAATCACCGATTACCAATGCGGACGGGGCTGTGGATGCGGTAATTACCAATGCCTTAATTTTAGATTGG
TGGGGTATTGTCAAAGCTGATGTGGGCATCAAGGACGGCAAAATTTTTAAGATTGGCAAAGCGGGAAATCCCTACATTCA
AGACAATGTGGATATTATTATCGGACCTGGTACCGAAGCGATCGCTGGGGAAGGTTTAATTCTGACCGCAGGCGGCATAG
ATTCTCACATTCATTTTATCTGTCCTCAACAAATAGAAGTAGCGATCGCCTCTGGGATTACCACCATGATTGGGGGAGGC
ACTGGACCCGCCGCAGGCACTTCCGCCACTACCTGTACCCCAGGTCCTTGGAATATCTACAAAATGCTCCAAGCAGCAGA
AGCTTTTCCCATGAATTTAGGCTTTTTGGGTAAGGGTAATAGTGCCAAACCCGAAGCATTAAATGAACAGATTGAAGCAG
GAGCAATGGGCTTAAAACTCCATGAAGACTGGGGAACTACTCCCTCAGCCATAGATAATTGCCTAAGTGTTGTCGATCGC
TACGATGTCCAAGTGGCAATTCACACCGATACCCTCAACGAAGCTGGATTTGTCGAAAATACGATCGCTGCTTTTAAAGG
TCGAGTTATTCATACCTATCACACCGAAGGCGCAGGCGGTGGTCATGCTCCCGATATTATTAAAATCTGTGGTGAAGCAA
ATGTCCTCCCTTCTTCTACCAATCCCACCCGTCCCTATACCGTCAATACCCTTGAAGAACACCTCGATATGTTGATGGTG
TGTCATCACCTTGATCCCAGTATTCCTGAAGATGTCGCCTTTGCCGAGTCTCGCATCCGCCGTGAAACCATCGCTGCCGA
AGATATTTTGCATGATCTTGGGGCATTTAGTATGATTTCCTCCGACTCTCAGGCAATGGGAAGAATTGGTGAAGTGATTA
TTAGAACTTGGCAAACCGCCCATAAAATGAAAACCCAACGGGGAGCTTTACCTGAAGATTCCAGTCGTAATGATAACTTC
AGAGCCAAACGCTACGTTGCCAAATACACGATTAATCCCGCCATTACCCACGGCATTGCTAACTATGTCGGCTCCATTGA
AGCAGGAAAAATTGCCGACCTATGTCTGTGGAAACCTGCCATGTTTGGCGTAAAGCCTGAAATGGTAATTAAAGGTGGAC
TTATAGCTTGGGCGCAAATGGGTGATGCTAATGCCAGTATTCCCACACCCCAGCCCGTACACATGCGTCCGATGTTTGGG
AGTTTTGGCGGGGCAATGTCCGCAACCTCTTTAACTTTTGTATCCCAAGCGGCGATCGCTAAGGGTATTCCCGAACAACT
GAACTTGAAAAAAATCGTGGTACCAACCCTAGGTAATCGCCAACTTTCTAAGCGTGATCTCAAACTAAATGATGCTCTGC
CCGTAATTGAGGTTAACCCTGAAACCTATGAGGTCAGAGCCGATGGCGAACTCCTAACCTGCGAACCAGCTACGATATTA
CCAATGGCACAAAGGTACTTTTTATTTTGA

Protein sequence :
MSYRMNRSAYAETYGITVGDRLRLADTELIIEVEKDYTTYGEEVKFGGGKVIRDGMGQSPITNADGAVDAVITNALILDW
WGIVKADVGIKDGKIFKIGKAGNPYIQDNVDIIIGPGTEAIAGEGLILTAGGIDSHIHFICPQQIEVAIASGITTMIGGG
TGPAAGTSATTCTPGPWNIYKMLQAAEAFPMNLGFLGKGNSAKPEALNEQIEAGAMGLKLHEDWGTTPSAIDNCLSVVDR
YDVQVAIHTDTLNEAGFVENTIAAFKGRVIHTYHTEGAGGGHAPDIIKICGEANVLPSSTNPTRPYTVNTLEEHLDMLMV
CHHLDPSIPEDVAFAESRIRRETIAAEDILHDLGAFSMISSDSQAMGRIGEVIIRTWQTAHKMKTQRGALPEDSSRNDNF
RAKRYVAKYTINPAITHGIANYVGSIEAGKIADLCLWKPAMFGVKPEMVIKGGLIAWAQMGDANASIPTPQPVHMRPMFG
SFGGAMSATSLTFVSQAAIAKGIPEQLNLKKIVVPTLGNRQLSKRDLKLNDALPVIEVNPETYEVRADGELLTCEPATIL
PMAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 9e-167 69
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 9e-167 69
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 5e-160 64
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-158 64
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 5e-160 64
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 5e-160 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syn7502_02532 YP_007106638.1 urease subunit alpha VFG0270 Protein 6e-154 65