Gene Information

Name : Syn7502_02511 (Syn7502_02511)
Accession : YP_007106619.1
Strain : Synechococcus sp. PCC 7502
Genome accession: NC_019702
Putative virulence/resistance : Virulence
Product : metal ion ABC transporter substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2488000 - 2488938 bp
Length : 939 bp
Strand : +
Note : PFAM: Periplasmic solute binding protein family

DNA sequence : 
GTGACAACCAATGCTTATCCTCTTAAATGGCTTCCTGCTCTAGTTATAGGGTTAACTATAGGGCTGATTTTGAGTGGATG
TGCTTCGAGTAAGGGCGAATTATCCAGCAACCCTAAAAATCCTAAGGTTATTCTCACTACTTTTACGGTTCTAGCTGATA
TGGGGCAGAATGTAGCGGGTGATAAGGCGATCGTGGAGTCATTAACGAAAATTGGCTCAGAAATTCATGGTTACGAACCC
ACCCCCAGTGATTTAGTTAGGGCAGCAAAAGCTAATTTAATTTTAGACAATGGTTTCGGGTTGGAACGCTGGGCAGATAA
GTTTTATAGCAATCTCAAAAATATCCCCCATGTCACCCTCAGTGAGGGCATAACTCCCGTTTTAATTAGTGGTGATACCT
ATAAAGGCAAACCTAATCCCCATGCTTGGATGTCGCCCCAGAATGCCTTGATTTATGTGGAAAATATCCGTAAGGCATTA
GTCAATCTTGATCCAGTCAATGCTGCCACCTATGATGCCAATGCTAAATCCTACAGCCAAGAGATCAACAACATTGATCA
ACAACTGCGCCAAACCATCTCTACACTACCACCAAATCACCGCTATATAGTCAGCTGTGAGGGAGCTTTTTCCTATTTAG
CTAAGGATTATGGACTCAAAGAATTGTATCTATGGTCAGTAAATGCTGATGCTCAGGGTACACCGCAGCAAATTCGTCAA
GTAATAGATACGGTCAAAGCTGAAAAAATCCCAGTCATATTTTGTGAAAGTACGGTGCGGGCTGATGCTCAAAAAGAAGT
TGCTAATCAAACAGGAGCGAAGTTTGGTGGGATATTTTATGTGGATTCACTATCACCGCCCGATGGAGTGGCATCGACCT
ATCTTAAATTGCTGGAATACAACGTTAATACATTAGTCAAAGGTTGGAAAGGAAACTAA

Protein sequence : 
MTTNAYPLKWLPALVIGLTIGLILSGCASSKGELSSNPKNPKVILTTFTVLADMGQNVAGDKAIVESLTKIGSEIHGYEP
TPSDLVRAAKANLILDNGFGLERWADKFYSNLKNIPHVTLSEGITPVLISGDTYKGKPNPHAWMSPQNALIYVENIRKAL
VNLDPVNAATYDANAKSYSQEINNIDQQLRQTISTLPPNHRYIVSCEGAFSYLAKDYGLKELYLWSVNADAQGTPQQIRQ
VIDTVKAEKIPVIFCESTVRADAQKEVANQTGAKFGGIFYVDSLSPPDGVASTYLKLLEYNVNTLVKGWKGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-73 55
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-73 50
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-73 50
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-73 50
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-73 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syn7502_02511 YP_007106619.1 metal ion ABC transporter substrate-binding protein BAC0439 Protein 8e-77 51
Syn7502_02511 YP_007106619.1 metal ion ABC transporter substrate-binding protein BAC0349 Protein 1e-73 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syn7502_02511 YP_007106619.1 metal ion ABC transporter substrate-binding protein VFG0525 Protein 1e-73 50