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Name : Syn7502_00233 (Syn7502_00233) Accession : YP_007104535.1 Strain : Synechococcus sp. PCC 7502 Genome accession: NC_019702 Putative virulence/resistance : Virulence Product : type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Function : - COG functional category : - COG ID : - EC number : - Position : 231282 - 232964 bp Length : 1683 bp Strand : + Note : PFAM: Type II/IV secretion system protein DNA sequence : ATGTCCTCTTCCCATCCACTACCATCGGAGCAATCAGTTTGGAAACAACTCAGGTGCAATCACCTATTTTCCTGTGACGA AGCACTTAGGCTTTTGGTTGATCCATCGGGCAGATTAAATATAAATGGCTTGGATGCAGAGCTAAATCATCGCTTCTTTC AGAAATTTGAAGATCGGAACTCTCTTCCTCCGGTAGTGCCTTTGCTGCTGTGGCAGAGTTGCTTTTACTTGGGCAGCCCC GTGGAAATTAGTGATGACATTCTTAAAAAAATTAGCGATCGCACCCTTACGGCTATCAAAATCATCCCGATCGCCTCCGA AAGCTATAGGGCATGGTTTCGTACCCAAAATCTCCCCGATCCCAAAAATATTACTTCCAATCGTTTAATCAATCCCTTAA CAGGGGAAACTGAAGAAGTTGATATTCGTGAAGTTACCGACCTTTACCTATCCCAAGCCGCCAACCAAACTCGCCGCATT AACGCCCTAATTTCTGTGGCAATGCAGCACCGTGCCAGTGATATTCACCTTGAGCCAACGGAAGAAGGTTTGAGATTTCG CTGTCGGATTGATGGTATTTTGCGGGATATTAAAACCCTACCCCTAGAGGTCAGCCGCCGTATTATTGTTGCCCTTAAAG TGATGTGTAACATGGATATTGCCGAAAGTCGCAGACCCCAAGACGGGCGCATTGGCAGAAGCTACACCGAGGAAAATACC GAAAGTGCCAATTTAGATATGCGCGTTAGCACCTTGCCCTGTGTTAATGGCGAAAAAGTCGTAATTAGATTATTACCAAG GCGGAATCCATTTACAGGAAATATTCAAGGTTTAGGATTTACGCCCAGAGCTTTACAAACCTATAGCACTTGGTTACAAC AGCCCCAGGGGTTAATTATTATGACGGGACCCACTGGCTCAGGTAAAACTAGTACCCTTTATACCAGCCTGCAAATGATT GCCACTGAGCATGTCAATGTGGTCACAGTCGAAGACCCCGTAGAATATATCCTGCCTAATATTACCCAAACCCAAGTACA TGAGCTGGCAGGGATGACCTTTGCGGCAGGATTAAGGGCGATTTTGCGACAAGACCCTGATATTGTCATGGTGGGCGAAG TCAGAGACCCTGAAACGGCAGAAACTGTGATTAGAGCAGCTTTGACAGGACACCTAGTACTTAGTACCATGCACACCAAT GATGCTGCCAGTGCCATTCCTCGCCTTAAGGACTTAGGACCAGACCCCGGCTTAATTAGTGATGCTTTGTTAGGTATAGT GGCACAGCGTCTAGTGCGTAAGGTTTGTCCCCACTGCGCTCAACCTCATATCCCTTCTGATACGGAACTCATGGCTTTAA CGCTTAGTAGAAGTGATATTGGCAGCAACTGGCGTAAGGGTAAAGGCTGTGAAAAATGTTTAGGATCGGGATATTTGGGA CGGGAAGCCGTGGTGGAATTATTGGATGTGAATGATCATGTACGTCGAATTATCTATGAAGGCAATATTACCCAAATGAA TCGGTATTTAAGTGAAATTGATTTTGATTCCTTTCGCCTCGCTGCCATTGATAAGGTGATTAGGGGAGTTACAACCGTTG AAGAAGTGACAAGAGTTTTACCACGCAGCGCACTAGTACATAGGTCTGTGTTTGTACCTAGGCAAATATCTAACGCCAGT TAA Protein sequence : MSSSHPLPSEQSVWKQLRCNHLFSCDEALRLLVDPSGRLNINGLDAELNHRFFQKFEDRNSLPPVVPLLLWQSCFYLGSP VEISDDILKKISDRTLTAIKIIPIASESYRAWFRTQNLPDPKNITSNRLINPLTGETEEVDIREVTDLYLSQAANQTRRI NALISVAMQHRASDIHLEPTEEGLRFRCRIDGILRDIKTLPLEVSRRIIVALKVMCNMDIAESRRPQDGRIGRSYTEENT ESANLDMRVSTLPCVNGEKVVIRLLPRRNPFTGNIQGLGFTPRALQTYSTWLQQPQGLIIMTGPTGSGKTSTLYTSLQMI ATEHVNVVTVEDPVEYILPNITQTQVHELAGMTFAAGLRAILRQDPDIVMVGEVRDPETAETVIRAALTGHLVLSTMHTN DAASAIPRLKDLGPDPGLISDALLGIVAQRLVRKVCPHCAQPHIPSDTELMALTLSRSDIGSNWRKGKGCEKCLGSGYLG REAVVELLDVNDHVRRIIYEGNITQMNRYLSEIDFDSFRLAAIDKVIRGVTTVEEVTRVLPRSALVHRSVFVPRQISNAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-63 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-63 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Syn7502_00233 | YP_007104535.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG2048 | Protein | 4e-65 | 42 |
