Gene Information

Name : Syn7502_01954 (Syn7502_01954)
Accession : YP_007106120.1
Strain : Synechococcus sp. PCC 7502
Genome accession: NC_019702
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1953940 - 1955358 bp
Length : 1419 bp
Strand : -
Note : PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I

DNA sequence :
ATGGCTCAGACTCCCCAAGAAGTCTTGACATTAATTCAAGAGCAAGACATTAAGATTATTGATCTCAAATTTATTGATAT
GCCAGGTACATGGCAGCATTGTTCTTTTTACTATAACCAAATTGATGAAAGCTCTTTCACCGATGGAGTTCCCTTCGATG
GTTCTAGTATTCGTGGCTGGAAAGCTATCAACGAATCTGATATGGCGATGGTTCCCGATCCTACAACAGCATGGATTGAT
CCATTTATGGAAGAACCAACTCTCAGCATGATTTGTAGTATCAAAGAACCTCGTACTGGAGCAGACTACAATCGCTGCCC
CCGTAACATTGCCAAAAAAGCCCTAGACTATCTCTCTAGTACTGGCATTGGTGATACTGCCTATTTTGGTCCTGAGGCAG
AATTTTTTATGTTTGATAGCGTCACCTATGACCAAACTATTAACTCTGGTTACTATGAAGTAGAATCTAGCGAAGGTTCA
TGGAATACTGGTAGACAAGAACCTGGCGGTAATCTCGGTCATAAAATTCGAGGCAAACAAGGTTATTTTCCTGTTTCCCC
ATCGGATTCTTTTCAAGACATTCGCACAGAAATGTTGCTAACTATGGCAAAATGCGGTGTTCCCATTGAAAAACACCACC
ACGAAGTGGCAACAGGGGGGCAAGCAGAACTCGGCTTCCGATTTGCCAGTATGATTCAGGCAGCAGACTATCTAATGACC
TATAAATATGTCATTAAAAATGTAGCTAAAAGATACAACAAAACTGTAACTTTTATGCCTAAGCCTCTATTTGGTGATAA
CGGTTCTGGAATGCATACTCACCAATCAATTTGGCAAGGTGGCAACCCACTTTTCTGGGGAGATGGTTACGCTAATCTTA
GTCAAATGGCTCTCCATTACATTGGAGGACTGCTAAAACATGCACCCGCTCTATTAGCCATCACCAACCCTACAACTAAT
TCTTACAAACGTCTGGTTCCGGGCTTTGAGGCACCAGTGAACCTTGCGTATTCCCAAGGTAATCGTTCGGCTTCCATTCG
GATACCCCTATCAGGAACCAACCCTAAAGCCAAGCGTTTAGAATTCCGATGCCCCGATGCTACCAGTAATCCATACTTAG
CATTTTCGGCTATGCTCCTAGCTGGAATTGATGGAATCAAGAATCAAATTGATCCTGGTAATTCTCTGGATGTGGATATT
TATGAACTATCACCTGAAGAACTAGCCAAGATTCCTTCAACTCCTGGCTCATTGAGTGAAGCTCTATCTAACTTAGAAGA
TGATCACGAGTTTTTACTAGCAGGTGGCGTATTTACTGAGGACTTCATCCAGAACTGGATTTCTTATAAACGGAGTGAAG
CAGTAGGTATGAGTATTCGTCCCCATCCCTATGAATTCGCTCTTTATTATGATTGTTAA

Protein sequence :
MAQTPQEVLTLIQEQDIKIIDLKFIDMPGTWQHCSFYYNQIDESSFTDGVPFDGSSIRGWKAINESDMAMVPDPTTAWID
PFMEEPTLSMICSIKEPRTGADYNRCPRNIAKKALDYLSSTGIGDTAYFGPEAEFFMFDSVTYDQTINSGYYEVESSEGS
WNTGRQEPGGNLGHKIRGKQGYFPVSPSDSFQDIRTEMLLTMAKCGVPIEKHHHEVATGGQAELGFRFASMIQAADYLMT
YKYVIKNVAKRYNKTVTFMPKPLFGDNGSGMHTHQSIWQGGNPLFWGDGYANLSQMALHYIGGLLKHAPALLAITNPTTN
SYKRLVPGFEAPVNLAYSQGNRSASIRIPLSGTNPKAKRLEFRCPDATSNPYLAFSAMLLAGIDGIKNQIDPGNSLDVDI
YELSPEELAKIPSTPGSLSEALSNLEDDHEFLLAGGVFTEDFIQNWISYKRSEAVGMSIRPHPYEFALYYDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-100 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syn7502_01954 YP_007106120.1 glutamine synthetase, type I VFG1399 Protein 6e-127 58