Gene Information

Name : Syn7502_01822 (Syn7502_01822)
Accession : YP_007105997.1
Strain : Synechococcus sp. PCC 7502
Genome accession: NC_019702
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1824055 - 1826664 bp
Length : 2610 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB

DNA sequence :
ATGCAGCCTACTCAAAACCAATTCACCGAAAAAGCTTGGGAAGCGATCGTGCGGACTCCAGAAATGTCCAAAGCTGCCCA
GCAACAACAGATTGAAAGTGAACATTTAATGAAGTCTTTATTAGAAGAGGAAGGTTTAGCAACCAGTATTTTTAATAAGG
CAAATGTCAGTGTGGAAAAACTGCGCGATCGCACTGAAGAATTTATCAATCGTCAACCGAAGGTAACAGGAAGTAATGCT
GCCTCTGGCTATCTAGGTCGGAGTATGGATACCTTGCTGGATCGGGCAGAATTGGCACGAAAATCCTTTAATGATGACTT
TATTTCCATTGAGCATTTAGTTTTGGCATTTGCTAAGGACGATCGCTTTGGGAAAACATTACTCCAAGAATTTAGCTTAG
ATGAGGCTAAACTGCGTAAAATCATTGAGCAAATTCGCGGTAATCAAAAAGTGACTGATCAAACGCCAGAGAATAAATAT
GAGGCTTTAACTAAATATGGCAGAGACCTAACGGAATGGGCAAGGCAGGGCAAGCTTGATCCAGTAATTGGTCGAGATGA
GGAAATTCGCCGCACCATTCAAATTTTATCCCGCCGCACTAAAAATAATCCTGTATTAATCGGCGAACCGGGTGTGGGTA
AAACTGCGATCGCCGAAGGTTTAGCCCAGAGGATTTTAAGTGGAGATGTCCCTGAATCTTTGCGTGATCGGAAGCTAATT
GCCCTAGATATGGGAGCATTGATTGCAGGGGCAAAATATCGAGGTGAGTTTGAAGAGAGGCTAAAGGCTGTTCTCAAGGA
AGTGATGGAATCCCAAGGACGAATCGTGCTGTTCATCGATGAAATTCATACCGTAGTCGGTGCAGGTGCAACCCAAGGAG
CCATGGATGCCAGCAATCTCTTAAAACCAATGCTTGCCAGAGGAGAACTGCGTTGTATTGGTGCCACCACCTTGGATGAA
TATCGCAAATATATTGAAAAGGATGCAGCTTTGGAGCGACGATTCCAGCAAGTTTTTGTTGATCAACCTTCCGTAGAGGA
TACAGTTTCTATTTTGCGAGGCTTAAAGGAACGCTACGAACTCCATCATGGGGTCAGAATTGCTGATAATGCCCTGATTG
CGGCTGCGACTTTATCCACTCGTTATATTAGCGATCGCTTTTTACCCGATAAAGCCATTGACCTGATGGATGAAGCTGCT
GCCAAGCTCAAAATGGAAATCACTTCTAAACCTGAAGAATTAGATGAAATTGATCGCAAAATTCTGCAACTGGAAATGGA
GCGTCTATCCTTAAAAAAGGAAACCGATGCTGATTCTAAAGAACGTGTGGAAAAATTAGTTAAAGAACTAGCAGAACTAA
AATCTGAACAAGTTACCCTGACGGCAAAATGGCAATCGGAAAAGCAAATTATTGATAACGTGCGTCGATGCAAAGAAGAA
ATCGAACGGGTAAATCTGGAAATCCAACAGGCTGAACGGGATTACGATCTGGAAAAAGCAGCAAAATTGAAATATGGCAA
GCTCACCGATCTACAAAGGGAACTACAAAAGGCAGAAGAACGCATTAATGAAACCCACACCGTCTCTAGTCGTCCCATGC
TCAGGGAAGAAGTCACAGAAGAAGATATTGCCGAAATTATTTCTAAATGGACAGGCATTCCCGTCCTAAAGCTGGTGGAA
TCAGAAAAGGCAAAGCTGCTATACCTAGAGGATGAACTCCATGAACGGGTAATTGGACAGAGCCAAGCTGTAACTGCGGT
TAGTGATGCCATTCAGCGATCGCGCGCAGGATTATCCGATCCCAATCGTCCCATCGCTAGTTTTATTTTCCTTGGTCCTA
CAGGCGTGGGTAAAACTGAACTTGCTAAGGCTCTAGCCAACTATCTGTTTGATACCGAAGAGGCAATGGTGCGGATTGAT
ATGTCTGAGTATATGGAAAAACATTCCGTTTCTCGACTTGTGGGCGCACCTCCGGGCTATGTGGGCTATGACGAAGGAGG
ACAGTTAACCGAGGCAATCCGTCGCCGTCCCTATGCTGTGATTCTATTTGATGAAATTGAAAAGGCACATCCCGATGTTT
TTAATATCATGTTGCAAATCCTTGATGATGGACGAGTGACAGATTCCCAAGGGCGCACTGTGGATTTTAAGAATGCCATT
ATTATTATGACCAGTAACATTGGTTCTCAATATATTTTAGATATCGGTGGAGATGATTCTAAGTATGAAATCATGCGCGA
TCGGGTGATGGAATCTATGCGTTCCAGTTTCCGTCCAGAGTTTTTAAATCGGATTGACGAGATTATTATTTTCCATTCTC
TGCGCCGCGAAGAACTCCGCCAAATTGTCAAACTTCAAGTACAACGCCTAGAACAACGTTTATCTGAACGTAAAATGTCT
TTGCATCTATCGGAATCCGCCCTAGATTTTGTAGCAGAAGTTGGTTACGATCCTGTCTATGGTGCGAGACCACTAAAACG
GGTAATTCAACGTCAACTGGAAACCCAAATTGCTAAGTCCATTCTCCGTGGTGATTTTATCGATGGCGATCATATCTTTG
TCGATGTGGAAAACGAACGTTTATCTTTTACTAAAAAGAAGCTAGATTAA

Protein sequence :
MQPTQNQFTEKAWEAIVRTPEMSKAAQQQQIESEHLMKSLLEEEGLATSIFNKANVSVEKLRDRTEEFINRQPKVTGSNA
ASGYLGRSMDTLLDRAELARKSFNDDFISIEHLVLAFAKDDRFGKTLLQEFSLDEAKLRKIIEQIRGNQKVTDQTPENKY
EALTKYGRDLTEWARQGKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRILSGDVPESLRDRKLI
ALDMGALIAGAKYRGEFEERLKAVLKEVMESQGRIVLFIDEIHTVVGAGATQGAMDASNLLKPMLARGELRCIGATTLDE
YRKYIEKDAALERRFQQVFVDQPSVEDTVSILRGLKERYELHHGVRIADNALIAAATLSTRYISDRFLPDKAIDLMDEAA
AKLKMEITSKPEELDEIDRKILQLEMERLSLKKETDADSKERVEKLVKELAELKSEQVTLTAKWQSEKQIIDNVRRCKEE
IERVNLEIQQAERDYDLEKAAKLKYGKLTDLQRELQKAEERINETHTVSSRPMLREEVTEEDIAEIISKWTGIPVLKLVE
SEKAKLLYLEDELHERVIGQSQAVTAVSDAIQRSRAGLSDPNRPIASFIFLGPTGVGKTELAKALANYLFDTEEAMVRID
MSEYMEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGRTVDFKNAI
IIMTSNIGSQYILDIGGDDSKYEIMRDRVMESMRSSFRPEFLNRIDEIIIFHSLRREELRQIVKLQVQRLEQRLSERKMS
LHLSESALDFVAEVGYDPVYGARPLKRVIQRQLETQIAKSILRGDFIDGDHIFVDVENERLSFTKKKLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-108 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syn7502_01822 YP_007105997.1 ATP-dependent chaperone ClpB VFG2076 Protein 2e-119 41