Gene Information

Name : Syn7502_01408 (Syn7502_01408)
Accession : YP_007105623.1
Strain : Synechococcus sp. PCC 7502
Genome accession: NC_019702
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1434190 - 1434921 bp
Length : 732 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGTTTGCCACAGAAGCATTATCTAAGCCGAAGTCCAGTTCTTCTTTAGGCTCTGTCTTGGTCGTAGAGGATGAAACCAT
AATTCGAGAAATGGTAGTTATGTCCCTGCGGGATGAAGGCTACGAAGTTTTAGTGGCAGAAGATGGTTATAACGCCCTAA
GTATTACCCATAAATGCACCGATACCCTAGATTTGATTATCTTAGATGTCATGATTCCCTACATTAATGGGCTGGATTTG
TGTAGGATGATCCGCCACGAAGGGAATGGCGTTCCTATATTAATGTTAAGTGCCAAGGGCAATGAATCCGATCGGGTTAT
AGGGCTGGAGGTTGGTGCCGATGACTATTTACCTAAGCCCTTTGGCATGAAAGAGTTATTAGCCAGGTGTAATGCTCTGG
TAAGGCGCAAAAATCAAAATTATCAAACCCAAGGTTCAACCCTAAGATTTGCTGACATCACCATCTTCCCCCAAGAATGT
CGAGTTACGGTTAGAGGCGAAGAGGTAAACCTAGCACCCAAGGAATTTCGGATTTTAGAACTATTTATGAGCCATCCCCG
TCGAGTCTGGTCACGGGAACAGTTATTAGAAAAAATTTGGGGGGCTGATTTTGTCGGCGACAGTAAAACCGTAGATGTGC
ATATTCGCTGGCTGCGGGAAAAATTAGAGGCTGATCCCAGTGATCCCAAATATCTAGTCACGGTCAGGGGCTTCGGCTAC
CGCTTAGGCTAG

Protein sequence :
MFATEALSKPKSSSSLGSVLVVEDETIIREMVVMSLRDEGYEVLVAEDGYNALSITHKCTDTLDLIILDVMIPYINGLDL
CRMIRHEGNGVPILMLSAKGNESDRVIGLEVGADDYLPKPFGMKELLARCNALVRRKNQNYQTQGSTLRFADITIFPQEC
RVTVRGEEVNLAPKEFRILELFMSHPRRVWSREQLLEKIWGADFVGDSKTVDVHIRWLREKLEADPSDPKYLVTVRGFGY
RLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-34 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 2e-44 46
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 2e-39 45
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 1e-38 44
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 1e-38 44
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 1e-38 44
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 1e-38 44
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 1e-38 44
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 1e-38 44
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 1e-38 44
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 1e-38 44
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 1e-38 44
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 1e-38 44
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 4e-36 43
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 6e-37 42
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 1e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 2e-40 43
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 8e-32 43
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 4e-34 42
Syn7502_01408 YP_007105623.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 1e-34 42