Gene Information

Name : Syn7502_01195 (Syn7502_01195)
Accession : YP_007105433.1
Strain : Synechococcus sp. PCC 7502
Genome accession: NC_019702
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1204869 - 1206863 bp
Length : 1995 bp
Strand : -
Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast

DNA sequence :
ATGGCTGTTGTGACCCAATCTTTAGAACAACTTTGCATTAACTCAATTCGATTTCTGGCTATAGACGCTGTAGAAAAGGC
TAAGTCTGGACATCCTGGATTACCAATGGGTGCGGCTCCAATGGCTTTTGTTCTGTTTGATCAATTTTTAAAATTTAATC
CCAAAAATCCTAAATGGGTCGATCGCGATCGCTTCGTCTTATCTGCTGGACATGGCTGTATGCTGCAATATGCCCTCCTC
CACCTCACAGGCTATGACAGTGTATCCATAGATGATATTAAGCAATTTCGTCAGTGGGGCAGTCCTACCCCCGGTCACCC
CGAAAATTTTGAAACTGCTGGGGTAGAAGTTACTACAGGTCCTCTTGGTCAAGGTGTTGGTAATGCTGTTGGTTTAGCGA
TCGCTGAAGCTCATTTGGCAGCACGTTTTAACAAGCCTGGTCACAATATTGTTGATCACTATACCTATGTCATTCTTGGT
GATGGCTGCAACATGGAAGGTATTGCCTCTGAAGCAGCTTCCTTGGGTGGACACCTCAAACTAGGTAAACTGATCATGCT
CTATGACAGTAACAGTATTTCCATTGATGGTAGCACTGACCTAGCCTTTACCGAAGATGTGGGCAAACGTTATGAGGCAT
ACGGCTGGCACGTTACCTATGTGACTGATGGTAATAATGATTTGGATGCGATCGCTAAGGCACTTGAAGAATCTAAATCG
GTTAAGGATAAACCTAGTTTAATTGTGGTCACAACCACCATTGGTTATGGCTCTCCTAAAAAAGCTGGAACTGCTGGTGT
CCACGGTGCCATGCTTGGAACTGATGAAGTAGCTGCTACCCGTGCCAATTTAGGTTGGGAGTACGAACCGTTTGTAGTGC
CTGAAGATGCCTATACTCGTTTTCATAAAGCGATCGCCAAAGGAGCAGAGGCTGAAGCAGAATGGAATGAGCGTTTTGCT
GCCTACGAAAAAGCCTATCCTGCCGAAGCTACCGAATACAAGCGGATCATGGCTGGTGAGTTGCCCGAAGGCTGGGAAAA
AGCACTAGAACCCGTAGCTCAAAAAGAAACCTCTACCCGTTTACTGTCTGAAGCTTGTTTAAATGCGCTATCTCCTATCC
TTCCAGAGTTTCTGGGTGGTTCAGCAGACTTAGCTCACTCCAATATGACCTATGTGAAAGGCTTGCCCGACTTCCAACCC
GGTTCCTATGAAGGTCGTAATTTCCGCTTTGGTGTGCGTGAACATGGTATGGGTGCCATCCTGAATGGCATGATCCTGCA
TGGCGGGACAATTCCCTACGGTGCTACCTTCCTCGTATTCGCAGACTATATGCGTGGTGCTATTCGTCTGTCTGCCCTAT
CAGAAGTAGGTGTGTTATATATTTTGACCCACGACTCTGTAATGCTAGGTGAAGACGGTCCGACCCACCAACCAGTGGAA
ACCCTCGCTTCTTTGCGTGTGATTCCTAATTTATTGGTTTTACGTCCCGCTGATGCTAAGGAAACCGTTGGAGTCTATCA
GGTAGCGATCGCTAACCGTAAGCGTCCTAGTGCGTTAGCATTCACTCGTCAAAACGTAAAAAATCTACCTGGCACTTCCA
TTGAAGGAACCAAAAAAGGTGGCTATATTGTTGTTGACGCCCCTAATCCTGAATTAATCTTTATTGCTACTGGTTCAGAA
GTTGAGTTGGCTGTTAAAGCAGCGGCAATTTTGACTAGCGAAGGTAAAGCTGTGCGGGTTGTGTCTATGCCTTCTCAAGA
ACTCTACAACGAGCAATCCGATGAATATAAAGAATCCGTCCTTCCAGCTTCTGTGAAAAAACGGGTCAGTGTGGAAGCTG
GTAGTACCTTTGGCTGGCATAAATATGTTGGCTCCGAAGGCGCAGTGATTGGGATGGATACCTTTGGTGCTTCAGCCCCA
GGTCCAGTTGTTTATGAAAAGTTTGGCTTTACCGTTGATAATATTATTGCTACAGCGCGTAAGGTTCTAGGTTAA

Protein sequence :
MAVVTQSLEQLCINSIRFLAIDAVEKAKSGHPGLPMGAAPMAFVLFDQFLKFNPKNPKWVDRDRFVLSAGHGCMLQYALL
HLTGYDSVSIDDIKQFRQWGSPTPGHPENFETAGVEVTTGPLGQGVGNAVGLAIAEAHLAARFNKPGHNIVDHYTYVILG
DGCNMEGIASEAASLGGHLKLGKLIMLYDSNSISIDGSTDLAFTEDVGKRYEAYGWHVTYVTDGNNDLDAIAKALEESKS
VKDKPSLIVVTTTIGYGSPKKAGTAGVHGAMLGTDEVAATRANLGWEYEPFVVPEDAYTRFHKAIAKGAEAEAEWNERFA
AYEKAYPAEATEYKRIMAGELPEGWEKALEPVAQKETSTRLLSEACLNALSPILPEFLGGSADLAHSNMTYVKGLPDFQP
GSYEGRNFRFGVREHGMGAILNGMILHGGTIPYGATFLVFADYMRGAIRLSALSEVGVLYILTHDSVMLGEDGPTHQPVE
TLASLRVIPNLLVLRPADAKETVGVYQVAIANRKRPSALAFTRQNVKNLPGTSIEGTKKGGYIVVDAPNPELIFIATGSE
VELAVKAAAILTSEGKAVRVVSMPSQELYNEQSDEYKESVLPASVKKRVSVEAGSTFGWHKYVGSEGAVIGMDTFGASAP
GPVVYEKFGFTVDNIIATARKVLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 1e-163 55
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 9e-156 51