Gene Information

Name : Syn7502_01039 (Syn7502_01039)
Accession : YP_007105285.1
Strain : Synechococcus sp. PCC 7502
Genome accession: NC_019702
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1048354 - 1049730 bp
Length : 1377 bp
Strand : +
Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGACAAACACGACTTCAGCAGCACCCACCCGTAGGGGCATATATCGCGGTACCCAAATGGACTGCGCCCGTAGAGGAGA
GATTACCGAAGAAATGCACTATGTGGCATGGCGAGAAAATCTACCTGTAGAATTAGTGCGTGACGAAGTGGCAAGAGGTA
GAGCAATTATTCCTGCTAACAAAAATCACACGAACCTTGAACCCATGATGATTGGGATTGCGTCTCGATGTAAGGTAAAT
GCCAATATTGGTGCATCACCTAATTCCTCGGATATGGCTGAAGAAGTGGCAAAACTACACCTTGCCGTCAAATATGGGGC
TGATACGGTCATGGATTTATCCACGGGTGGGGGAAATCTGGATACCATTCGCACCACAATTATTAATGCTTCGCCCGTTC
CCATTGGCACTGTACCGATTTATCAAGCATTGGAAAGTGTGCATGGCAGAATTGAAAACCTGACGGCTGATGATTTTTTA
CATATTATTGAAAAGCACGCCCAGCAAGGGGTGGACTATCAGACTATCCATGCAGGCATTTTAATTGAGCATTTGCCCCT
AGTTAAAAATCGGATTACAGGGATTGTCTCCCGTGGGGGAGGGATTTTGGCACGGTGGATGTTGGCACACCATAAACAGA
ATCCTCTTTATACTCACTTTAATGACATCATTGAGATTTTTAAAAAGTATGACGTGTCCTTCAGTTTAGGAGATTCTTTG
CGTCCCGGTTGTCAGCATGATGCCTCCGATGCCGCCCAGTTGGCAGAGCTAAAAACCCTTGGCAATCTGACTCGCCGTGC
TTGGGAACACAATATTCAAGTCATGGTTGAAGGTCCTGGTCATGTGCCGATGGATCAAATTGAATTTAATGTCAGAAAGC
AAATGGAAGAATGTTCCGAAGCTCCTTTCTATGTGCTGGGTCCCTTGGTTACGGATATTGCCCCTGGGTATGATCATATT
ACTTCGGCGATCGGAGCGGCAATGGCTGGTTGGTACGGTACGGCAATGCTGTGTTATGTTACGCCAAAGGAACACCTTGG
ACTGCCCAATGCCGAAGATGTAAGGAATGGGTTAATCGCCTACAAAATTGCTGCCCATGCTGCGGATATCGCTCGTCATC
GTCCGGGGGCGCGCGATCGCGATGATGCTTTATCCCATGCCAGATATAACTTTGATTGGAATCAACAGTTTGCCCTGTCC
CTTGATCCAGAAAGAGCTAAGGAGTACCACGATGAGACCTTACCTGCGGACATCTATAAAACAGCAGAGTTCTGTTCTAT
GTGTGGACCAAAGTTCTGTCCAATGCAAAGTAAAATTGATGCCGAGGCTTTAGCAGATTTGGAAAAATCCTTAGCAAAAC
ACCCAGTTGTAGTCTAA

Protein sequence :
MTNTTSAAPTRRGIYRGTQMDCARRGEITEEMHYVAWRENLPVELVRDEVARGRAIIPANKNHTNLEPMMIGIASRCKVN
ANIGASPNSSDMAEEVAKLHLAVKYGADTVMDLSTGGGNLDTIRTTIINASPVPIGTVPIYQALESVHGRIENLTADDFL
HIIEKHAQQGVDYQTIHAGILIEHLPLVKNRITGIVSRGGGILARWMLAHHKQNPLYTHFNDIIEIFKKYDVSFSLGDSL
RPGCQHDASDAAQLAELKTLGNLTRRAWEHNIQVMVEGPGHVPMDQIEFNVRKQMEECSEAPFYVLGPLVTDIAPGYDHI
TSAIGAAMAGWYGTAMLCYVTPKEHLGLPNAEDVRNGLIAYKIAAHAADIARHRPGARDRDDALSHARYNFDWNQQFALS
LDPERAKEYHDETLPADIYKTAEFCSMCGPKFCPMQSKIDAEALADLEKSLAKHPVVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 2e-120 63
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 2e-120 63