Gene Information

Name : Pse7367_3399 (Pse7367_3399)
Accession : YP_007104064.1
Strain : Pseudanabaena sp. PCC 7367
Genome accession: NC_019701
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4254291 - 4255133 bp
Length : 843 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: cyj:Cyan7822_0

DNA sequence : 
ATGATGCCTCGGATCCTCATCATTGACGATGATCCCAAAATTTCTGAATTAGTTACCCTTAATCTTGAACTTGCTGGCTA
TCAAGTCATTCAAGCAAGTGATGGCATAAAAGGGCAGGCTTTGGCGATCCAAATTCAGCCTGATATGGTTATTCTTGATT
TGATGCTACCGCGAGTAGATGGTTTTACCGTCTGTCAACGTTTGCGTCGGGATGAACGTACCGCTGATATCCCCGTTTTG
ATGCTGACTGCGATGGGGCAGACCCAGGACAAGGTAGAAGGGTTTAGTGCTGGTGCTGATGATTACCTAACCAAACCATT
TGAGCTAGAAGAGATGCTGGCCAGGGTGCGAGCACTGCTGCGGCGCACAAATAGGATTCCCCAAGCCGCTAAACATAGTG
AAATTCTCAATTATGGTGCACTTACGCTAGTGCCAGAGCGGTTTGAAGCGATCTGGTTCAACAACACGGTCAAGCTAACT
CATCTGGAATTTGAGTTATTGCATTGCTTGTTGCAGCGACATGGCCAGACGGTTTCCCCTAGTGAAATCCTCAAGGAAGT
GTGGGGCTACGAACCAGATGACGATATCGAGACGATCCGGGTGCATATTCGTCACCTGCGTACTAAGTTAGAACCAGACC
CACGTCACCCCAAGTATATTAAGACCGTCTATGGAGCTGGCTATTGTTTGGAGTTGCCAAATGCAACGGAATTAGAACCA
GAAACCGACGATGCGGAGCCAGCAATCCCTGCTAATGGCAATGGTAAAGCTCATTCTAATGAGACGATCGCTCCTGCTCC
TGTGGATCAAGAAAAACCAACTAATCCTCAAGCCTCAGCCTAG

Protein sequence : 
MMPRILIIDDDPKISELVTLNLELAGYQVIQASDGIKGQALAIQIQPDMVILDLMLPRVDGFTVCQRLRRDERTADIPVL
MLTAMGQTQDKVEGFSAGADDYLTKPFELEEMLARVRALLRRTNRIPQAAKHSEILNYGALTLVPERFEAIWFNNTVKLT
HLEFELLHCLLQRHGQTVSPSEILKEVWGYEPDDDIETIRVHIRHLRTKLEPDPRHPKYIKTVYGAGYCLELPNATELEP
ETDDAEPAIPANGNGKAHSNETIAPAPVDQEKPTNPQASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pse7367_3399 YP_007104064.1 winged helix family two component transcriptional regulator AF155139.2.orf0.gene Protein 9e-37 43
Pse7367_3399 YP_007104064.1 winged helix family two component transcriptional regulator BAC0308 Protein 1e-29 42
Pse7367_3399 YP_007104064.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 1e-41 42
Pse7367_3399 YP_007104064.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 2e-41 42
Pse7367_3399 YP_007104064.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 2e-41 42
Pse7367_3399 YP_007104064.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 2e-41 42
Pse7367_3399 YP_007104064.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 2e-41 42
Pse7367_3399 YP_007104064.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 2e-41 42
Pse7367_3399 YP_007104064.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 2e-41 42
Pse7367_3399 YP_007104064.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 2e-41 42
Pse7367_3399 YP_007104064.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 2e-41 42
Pse7367_3399 YP_007104064.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 1e-41 42
Pse7367_3399 YP_007104064.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 1e-40 41
Pse7367_3399 YP_007104064.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 3e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pse7367_3399 YP_007104064.1 winged helix family two component transcriptional regulator VFG1390 Protein 9e-38 42
Pse7367_3399 YP_007104064.1 winged helix family two component transcriptional regulator VFG0596 Protein 2e-28 41