Gene Information

Name : Pse7367_3012 (Pse7367_3012)
Accession : YP_007103690.1
Strain : Pseudanabaena sp. PCC 7367
Genome accession: NC_019701
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3777960 - 3780455 bp
Length : 2496 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit

DNA sequence :
ATGTTTGAACGCTTTACAGAAAAGGCTATCAAAGTCATTATGCTGGCCCAAGAGGAGGCTCGTCGTCTGGGGCACAACTT
TGTTGGCACAGAACAGATTCTCTTAGGGTTGATTGGAGAAGGTACTGGCGTTGCTGCCAAAGTGCTGAAATCCATGGGAG
TAAACCTTAAAGATGCTCGCATCGAAGTAGAAAAAATTATTGGTCGCGGCTCTGGGTTTGTGGCGGTTGAAATTCCCTTT
ACGCCAAGAGCAAAGCGCGTTTTAGAACTTTCCTTAGAAGAAGCCAGGCAACTTGGCCACAACTATATTGGCACTGAGCA
TTTGCTCTTAGGGCTGATTCGTGAAGGCGAAGGGGTTGCAGCCAGAGTATTAGAAAACCTTGGCGTTGATCTATCCAAGG
TGCGTACCCAAGTCATCCGCATGTTAGGCGAGACTGCTGAAGTGCCCTCTGGTGGCAGTCAGGGACGTACCAAAACCCCA
ACCCTGGATGAGTTTGGCTCGAACCTAACCCAGATGGCATCGGAAGGTAAGCTGGATCCCGTAGTTGGTCGCCAGAAGGA
AATTGAGCGGGTAATTCAAATCCTTGGCCGTCGTACCAAGAATAACCCGGTGCTGATCGGTGAGCCTGGGGTTGGTAAAA
CCGCGATCGCCGAAGGTTTGGCACAGCGGATTAACGACACCGACGTACCAGATATTTTGCAAGAAAAGCGCGTAGTCACC
CTTGATATTGGCTTGCTGGTAGCCGGTACCAAGTATCGCGGTGAATTTGAAGAGCGGCTGAAGAAGATCATGGACGAGAT
TCGATCGGCTTCAAATGTGATTCTGGTAATTGATGAAGTCCATACCCTGATCGGTGCTGGTGCTGCCGAAGGGGCGATCG
ATGCTGCTAATATCCTCAAGCCTGCTTTGGCCAGAGGTGAACTGCAATGTATTGGGGCAACCACCCTGGATGAATACCGC
AAACACATCGAGCGGGATGCGGCTCTAGAACGTCGCTTCCAGCCTGTGTATGTCGGTGAACCCAGTGTGGCCGAAACGAT
CGAAATTCTCTATGGTTTGCGTGAGCGCTATGAACAGCACCACAAACTAAAAATTTCCGATGATGCGCTTGAAGCAGCAG
CCAAACTATCCGATCGCTATATTTCCGATCGTTACTTGCCCGACAAGGCGATCGACTTGATCGACGAAGCTGGCTCACGG
GTACGGTTAATTAATTCCCAATTGCCTCCGGCGGCCAAAGAACTAGACAAAGAGTTGCGCCAGGTCGTCAAGGAAAAAGA
AGAAGCGGCCAGAGCCCAGGAATTTGACAAGGCCGGGGAACTACGCGATCGGGAGATGGAAATCAAGCAAGAAATCCGCT
CGATCACCCAGGCCAAAAAATCAGAAGAAACAGGCGAAGAAGTTTCTCCAGTCGTGGACGAAGAGGACATTGCCTATATT
GTCAGTTCCTGGACTGGTGTGCCAGTGAGCAAGCTAACCGAGTCTGAGTCCGCCAAGTTGATGCAAATGGAAGATACCCT
GCATCAGCGCATTATTGGCCAGGAAGAAGCAGTTAAGGCTATTTCCAGGGCAATTCGCCGCGCCAGGGTTGGCCTCAAGA
GTCCCGATCGACCGATCGCTAGCTTTATCTTCTCTGGCCCCACTGGGGTTGGTAAAACTGAGCTAACCAAGGCGCTTGCC
ACCTACTTCTTTGGCTCCGAAGATGCCATGATCCGTCTGGACATGTCTGAGTTTATGGAGCGGCACACGGTATCCAAGCT
GATTGGCTCGCCTCCTGGCTATGTGGGCTACAACGAAGGCGGTCAACTCACTGAAGCGGTGCGTCGTCGCCCCTACACGG
TGGTATTGTTCGATGAAATTGAAAAAGCTCACCCCGATGTATTCAACTTGCTGTTGCAAATCCTGGAAGATGGTCGTTTG
ACTGACTCCAAGGGACGCACGGTTGACTTCAAGAATACCTTGCTGATCATGACTTCTAACATTGGCTCTAAGGTAATCGA
GAAGGGCGCAATCACCCTGGGCTTCGATATTGCCGAAGATGAAGAAGAATCCAAATATCAAAGGATTCGATCGCTGGTCA
ATGAAGAGTTGAAACAGTACTTCCGCCCAGAATTCCTCAATCGTCTAGATGAGATTATTGTCTTCCGTCAGCTCACCAAG
GACGAGGTCAAGGAAATTGCCAATCTGTTGCTCAAGGAAGTATTTGTCAGATTGCGCGAGAAAGATATTGAACTGAGTGT
AACTACTAAGTTCATGGATCGCCTGGTGGAAGAGGGCTATAACCCCAGCTATGGTGCACGTCCATTACGTCGAGCGATCA
TGCGCTTGTTAGAGGACTCCCTGGCTGAAGAAATCCTCACTGGCAAGGTGCGTGCAGGGGCTGCGGTGGAGATGGATGTG
GATGATGATAATAAAATCGTCTGCCGTGAAGTAGAGCGCCAGGATGCGATCGCTGGTAGTGATGAAAATCGTCAGCTAAT
GCCATCTTCTAACTAG

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVPSGGSQGRTKTP
TLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRINDTDVPDILQEKRVVT
LDIGLLVAGTKYRGEFEERLKKIMDEIRSASNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR
KHIERDAALERRFQPVYVGEPSVAETIEILYGLRERYEQHHKLKISDDALEAAAKLSDRYISDRYLPDKAIDLIDEAGSR
VRLINSQLPPAAKELDKELRQVVKEKEEAARAQEFDKAGELRDREMEIKQEIRSITQAKKSEETGEEVSPVVDEEDIAYI
VSSWTGVPVSKLTESESAKLMQMEDTLHQRIIGQEEAVKAISRAIRRARVGLKSPDRPIASFIFSGPTGVGKTELTKALA
TYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRL
TDSKGRTVDFKNTLLIMTSNIGSKVIEKGAITLGFDIAEDEEESKYQRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLTK
DEVKEIANLLLKEVFVRLREKDIELSVTTKFMDRLVEEGYNPSYGARPLRRAIMRLLEDSLAEEILTGKVRAGAAVEMDV
DDDNKIVCREVERQDAIAGSDENRQLMPSSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pse7367_3012 YP_007103690.1 ATPase VFG0079 Protein 0.0 60
Pse7367_3012 YP_007103690.1 ATPase VFG0080 Protein 2e-155 53